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scnpilot_solids1_trim150_scaffold_3568_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3568_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..2387)
DNA (2385bp) protein (795aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDC9_NAKMY
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACV81619.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
scnpilot_solids1_trim150_scaffold_3568_curated_2
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2387..3013)
DNA (627bp) protein (209aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon monoxide dehydrogenase small subunit n=1 Tax=Terrabacter carboxydivorans RepID=L7X082_9MICO
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJK13571.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
scnpilot_solids1_trim150_scaffold_3568_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3010..3894)
DNA (885bp) protein (295aa)
FAD-binding molybdopterin dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDD1_NAKMY
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:ACV81621.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_3568_curated_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4234..5721)
DNA (1488bp) protein (496aa)
Uracil-xanthine permease n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDZ3_INTC7
Xanthine/uracil permease {ECO:0000313|EMBL:EXG79427.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
uracil-xanthine permease
scnpilot_solids1_trim150_scaffold_3568_curated_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5995..6306)
DNA (312bp) protein (104aa)
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:EPR76156.1}; EC=4.2.1.96 {ECO:0000313|EMBL:EPR76156.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W0N4_9MICO
scnpilot_solids1_trim150_scaffold_3568_curated_6
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6425..7180
DNA (756bp) protein (252aa)
Molybdate transport system substrate-binding protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KTL4_9BURK
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYC52630.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
scnpilot_solids1_trim150_scaffold_3568_curated_7
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7247..7882)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036D8310
Putative two-component system response regulator {ECO:0000313|EMBL:AHH22016.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
two-component system response regulator
scnpilot_solids1_trim150_scaffold_3568_curated_8
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7891..9273)
DNA (1383bp) protein (461aa)
Signal transduction histidine kinase n=1 Tax=Frankia sp. QA3 RepID=I8R007_9ACTO
Signal transduction histidine kinase {ECO:0000313|EMBL:KJE21249.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
two-component system sensor kinase
scnpilot_solids1_trim150_scaffold_3568_curated_9
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9507..11162
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WWF2_9MICO
HNH nuclease {ECO:0000313|EMBL:KGN33389.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
HNH endonuclease
scnpilot_solids1_trim150_scaffold_3568_curated_10
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11217..12989)
DNA (1773bp) protein (591aa)
CdaR family transcriptional regulator n=1 Tax=Nonomuraea coxensis RepID=UPI00036A6764
Purine catabolism regulatory protein {ECO:0000313|EMBL:AHK29057.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
pucR; transcriptional regulator; K09684 purine catabolism regulatory protein
scnpilot_solids1_trim150_scaffold_3568_curated_11
Mogibacterium sp. CM50, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13291..14265
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003627A3B
PF11392 family protein {ECO:0000313|EMBL:EJU20676.1}; TaxID=936375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium sp. CM50.;"
scnpilot_solids1_trim150_scaffold_3568_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14424..17465
DNA (3042bp) protein (1014aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDD2_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:ACV81622.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
hypothetical protein
Displaying 12 items

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