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scnpilot_solids1_trim150_scaffold_1074_curated_42

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(39941..41494)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 517.0
  • Bit_score: 396
  • Evalue 1.70e-107
sugar ABC transporter n=1 Tax=Rhodococcus opacus RepID=UPI00029CC99B similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 517.0
  • Bit_score: 396
  • Evalue 4.10e-107
Ribose import ATP-binding protein RbsA 2 {ECO:0000313|EMBL:AHK29084.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 517.0
  • Bit_score: 396
  • Evalue 5.80e-107

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGACGATGACAGCTCCCAGCGGCGCCGCGGATATGGCCTTGTCGATCCGCGGATTGAGCAAGCGGTTCGGGGGGACGAATGCACTGTCGACCGTCGATCTCGATCTCAGGCGTGGGACCGTTCACGCGCTGTTGGGTCACAACGGATCCGGAAAGTCGACGCTGATCAAACTCCTCGGTGGGTATCACGTCGCCGAAGCGGGCTCGATCACCGTCAACGGTGAGCCCATGCCGCTGCGTCACACGGCAAGTGATTCCGACGGTGCCGGAATTCGCTTCGTGTATCAGGATCTCGGCCTCATCGGGTCGATGTCCGTGGCGGAGAACATGGCGATGGGCGTCGGCTATGCGACGTCGCGCGTGGGGTCGATCGTTTGGCGTACGCAATACCGGGAGGCGCGGCGGCAACTTCGCCGATTGAACACGGACGTCGATCCGCGGGATCTCGTGCACGATCTGGGTCCGGTGGAGCAGACCATGCTCGCAATCGGTCGCGCATTGCAGGGCGTCGGGCATCATCGCGGCATCTTGGTCCTCGATGAGCCTACGGCGCGGTTGCCGCAGTCGGAGGTGGTCCGTCTCCTGGAGATCGTTCGAGCCTTGAAGGCTGACGGCGTCTCTATCATCTACGTCACGCATCGCCTGGACGAAGTGTTCGAGATCGCGGACGACATCACGATATTGCAGGCCGGCGAGGTTATCTTCTCCGGCGCGGCCGGTACGACGAACGAGCGGCAGGTCGGCAATATGATCGCCGGCCGCAGTCTCGACGACGCGACACCGCCGCGACCGGTTCCTCAGCCCGCCGGACTCGACCGGGCCTCGGCCGTGGTCCAAGTCTCGGGCTTGAGCGGCCGCCGCGTACGGTCCGTCGATTTCGAGGTCCAGCGGGGGGAGATGCTCGTCATCATCGGGTTGGTGGGCTCCGGAAGGTCGGAGCTCGGACGCCTGATCTTCGGCCTGCAGCCCATCACGGAAGGGACTGTCCGTGTGGGCGACGCGGTCCCGCGATCGGAAATCGATCCGCGCTGGGCCGCGCAGCAGGGGATGGCCTATGTCCCGCAACAGCGCGATATGGGCCTGGTGCTCGGGGAAAGCATTGCCGAGAATCTTGCGTTGACCTCCCTGAAGCAGTTTTTGCGCAGATTCGCAGTGAGGTCGCCTCTGGTCAATGAGATGGCTCGCGGCCTGATCAAGAAGCTGGGAATCGTCTCACGTGATGAGCGTCAGATGGTCAACAGCCTGTCCGGCGGCAACCAGCAGAAGGTCGCGTTGGGCAAGTGGATTCGCAACGATTTGAAACTCATCATTATGGACGAGCCACTCCAAGGCATCGATATCGGCGCGAAGATCGATATTCTGCGGTCTATTCGCTCCTCAGTCCTGGACCGCGGTGGAGCCGCAATATGGCTGGAATCTGATATCGAATTCGTACCCGATTATGCGGACAGAGTGTTGGTGATGCGCGACGGCTGCATCACCCACGAGCTGACTCACAAACCGATTTCCCTCGATGAAATGATGATGGCTCTCTATGGGACGGTGCATCGATGA
PROTEIN sequence
Length: 518
MTMTAPSGAADMALSIRGLSKRFGGTNALSTVDLDLRRGTVHALLGHNGSGKSTLIKLLGGYHVAEAGSITVNGEPMPLRHTASDSDGAGIRFVYQDLGLIGSMSVAENMAMGVGYATSRVGSIVWRTQYREARRQLRRLNTDVDPRDLVHDLGPVEQTMLAIGRALQGVGHHRGILVLDEPTARLPQSEVVRLLEIVRALKADGVSIIYVTHRLDEVFEIADDITILQAGEVIFSGAAGTTNERQVGNMIAGRSLDDATPPRPVPQPAGLDRASAVVQVSGLSGRRVRSVDFEVQRGEMLVIIGLVGSGRSELGRLIFGLQPITEGTVRVGDAVPRSEIDPRWAAQQGMAYVPQQRDMGLVLGESIAENLALTSLKQFLRRFAVRSPLVNEMARGLIKKLGIVSRDERQMVNSLSGGNQQKVALGKWIRNDLKLIIMDEPLQGIDIGAKIDILRSIRSSVLDRGGAAIWLESDIEFVPDYADRVLVMRDGCITHELTHKPISLDEMMMALYGTVHR*