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scnpilot_solids1_trim150_scaffold_378_curated_2

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(649..1629)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Namu_0127 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIX4_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 325.0
  • Bit_score: 324
  • Evalue 9.60e-86
Ku protein; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 325.0
  • Bit_score: 324
  • Evalue 3.00e-86
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 325.0
  • Bit_score: 324
  • Evalue 1.30e-85

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCGTGCTGTATGGAGTGGTTCCCTGAATTTCGGGTTGGTGACCATCCCGATCAAGCTGTACAGCGCCGTCGAAAGCCATGATGTGCCGATGCACCAGGTCCACGCGGCCGACGGCGGGCGAATCCGCTACCGGCGGGTATGCGAGGTCTGCGGCAAGACGATCGAGATGCGAGACATCGCCAAGGCGTATCAGACGCCCGACGGGGGCCTGGTGGTGCTCGACGACGAGGACTTCGCGTCGCTGCCCGCGGACCGATCCAAGGAGATCGCGGTGGAGCAGTTCGCCCCCGCCGAGCAGATCGACACGCTGCTGTTCGACCGCGCCTACTACATGGAGCCGTCGGCGCCGGCGGCCAAGGCCTACGTACTGCTGCGCACGGCGCTGGAACAGACGGACAGGGTCGCCATCGTGCGATTCGCGCTGCGGCAGCGCACCCAACTCGGGGCGCTGCGTGTGCACGACGACGTGCTGGCGGTGCAGACCCTCCGCTGGCCGGACGAGGTCCGATCGTTCGAGCTGCCGGAGAAAGTCGGCCAGGCCACGGTGACCCAGCGCGAACTGCAGATGGCCGCGACCCTGGTGGATTCGTACGCGGCGGATTTCGAACCGGAGAAATACACCGACGAGTACCGCGACGAGATGGAGGCACTGATCGACGCGAAACTCGCCGGGGGACAGGCATTCCCGGAGACCCCGGCCGCGGAGGAGGGGCAGGATGCCGAGGTGCTCGACCTGCTCGCCGCCCTGGAACGCAGCGTGCAGCGCCGCGGGGCCGACGCGGGGCGGGGAGCGGCGACCCGCCGGCGGACCGGTTCCCGCGCCGGCGCGGGCGACGGGGCCGCGACAGGCCGCAAGACGGCCCGCCCGGGCAAGGCGCAGTTGAAGGACGTCTCGCGGGCGGCCGATTCCAAGCCCACGCCGCGGCGCAAGCGCGCCGCTGACTCCGGCGACAAGACCCGCGAGCGCAAGGGCGCCTGA
PROTEIN sequence
Length: 327
MRAVWSGSLNFGLVTIPIKLYSAVESHDVPMHQVHAADGGRIRYRRVCEVCGKTIEMRDIAKAYQTPDGGLVVLDDEDFASLPADRSKEIAVEQFAPAEQIDTLLFDRAYYMEPSAPAAKAYVLLRTALEQTDRVAIVRFALRQRTQLGALRVHDDVLAVQTLRWPDEVRSFELPEKVGQATVTQRELQMAATLVDSYAADFEPEKYTDEYRDEMEALIDAKLAGGQAFPETPAAEEGQDAEVLDLLAALERSVQRRGADAGRGAATRRRTGSRAGAGDGAATGRKTARPGKAQLKDVSRAADSKPTPRRKRAADSGDKTRERKGA*