ggKbase home page

scnpilot_solids1_trim150_scaffold_378_curated_10

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 11099..12016

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000368C2DD similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 291.0
  • Bit_score: 329
  • Evalue 2.80e-87
Glycine/betaine ABC transporter {ECO:0000313|EMBL:EWT07433.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 293.0
  • Bit_score: 336
  • Evalue 3.20e-89
glycine betaine transport system permease; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 293.0
  • Bit_score: 321
  • Evalue 2.40e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAGCATGATCGCAGCCACAGACGTACTGGGCGCGGATACCGTTCCGCGCATCAACATCGGCGGATTCTTCAGTGCCATCGTCGACTGGATCCAGGAGTACCTGCCGGCGCTGCTCGGATTCATCAAGGCGGTGCTGAAGAATCTGGACGCGGGCCTCGCCGCCGGGCTCAATGCGGTGCCTGCGCTGCTGATGGTGGTGATCCTCGCCGCGATCGGATTCCTGCTGCGCGGCTGGCAGTTCGCGCTGTTCACGCTGATCGGCATGATCATCATCGTGGGCATGCGCTACCAGGGTGCGAGCATGTGGTCGCTGGCCATGGACACGCTGGCCCTGGTGATCATCGCCGGGGCGATCGCCATGATCATCGCCGTGCCGCTGGGCGTGCTGGCCGCGCGCAGCGAGGTCGCGTCCAAAACGATCAAGCCCGTCATGGACTTCATGCAGACCATGCCGGCCTTCGTCTACCTGATCCCGGCGATCTTCTTCTTCTCCGCGAGCACCACCGCCGGCATCATCGCCACGATCGTCTTCGCGATGCCGCCGGGCGTCCGGCTCACCGAACTCGGCATTCGCCAGGTGGACGGCGAAATGGTCGAGGCCGGGCACGCTTTCGGCACCAAACCGTTCAACATTCTCACCCGGATCCAGATCCCGCTGGCGATGCCCACCATCATGGCCGGGGTCAACCAGGTGATCATGCTGTCGCTGTCCATGGTGGTGATCGGCACCATGGTCGGCGCCGGCGGACTCGGCATGCCGGTCTACGAGGGCATCACCCGGCTGGATGTGGCGGTCGGGTTCGAGGGCGGCGTCGCCGTCGTGATCCTCGCGATCTACCTCGACCGCCTCACCGCCGCGCTGGGCGATCGATCCGCCGTCGCCAAGGCGACCAAAGCAGCGATGAAAGCGAGGTGA
PROTEIN sequence
Length: 306
MSMIAATDVLGADTVPRINIGGFFSAIVDWIQEYLPALLGFIKAVLKNLDAGLAAGLNAVPALLMVVILAAIGFLLRGWQFALFTLIGMIIIVGMRYQGASMWSLAMDTLALVIIAGAIAMIIAVPLGVLAARSEVASKTIKPVMDFMQTMPAFVYLIPAIFFFSASTTAGIIATIVFAMPPGVRLTELGIRQVDGEMVEAGHAFGTKPFNILTRIQIPLAMPTIMAGVNQVIMLSLSMVVIGTMVGAGGLGMPVYEGITRLDVAVGFEGGVAVVILAIYLDRLTAALGDRSAVAKATKAAMKAR*