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scnpilot_solids1_trim150_scaffold_378_curated_18

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(20688..21092)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 132.0
  • Bit_score: 139
  • Evalue 3.30e-30
twitching motility protein PilT n=1 Tax=Glaciibacter superstes RepID=UPI0003B5B405 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 133.0
  • Bit_score: 149
  • Evalue 3.00e-33
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 131.0
  • Bit_score: 134
  • Evalue 1.80e-29

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Taxonomy

Tetrasphaera jenkinsii → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGACGATCTATCTCGACACGTCGGCGCTGGCGAAACTGGTGGTGGCCGAAGAGGAGTCCGGCGCGCTGTTCCAGTGGCTCAGTGAGCAGACGGAGTCCGGCGAGGTGCTGGTGAGCTGCGACATCGCACGCACGGAACTTCTGCGACTCACTCGGCGCCTCGCGCCCGATCGGATGACGCGGGCTCGGGACATACTCGATTCGGTGACGCTCACGACGGTGACCACGGCATTGTTCGAGGCGGCAGGCCGGCTCGACCCGCCCGAGCTCCGCAGCCTGTGCACGCTGCACCTGGCCGCCGCGCTCGATCTGGGCGACGACCTCAATGTGATGGTGTGCTACGACCGTCGGCTTGCCGAGGCGGCGCGGAGCCAGGGGATTCGCGTGGGTGCACCAGGGGCTTGA
PROTEIN sequence
Length: 135
VTIYLDTSALAKLVVAEEESGALFQWLSEQTESGEVLVSCDIARTELLRLTRRLAPDRMTRARDILDSVTLTTVTTALFEAAGRLDPPELRSLCTLHLAAALDLGDDLNVMVCYDRRLAEAARSQGIRVGAPGA*