ggKbase home page

scnpilot_solids1_trim150_scaffold_378_curated_29

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 29436..29795

Top 3 Functional Annotations

Value Algorithm Source
flagellar hook-basal body protein FliE n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5AF5C similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 110.0
  • Bit_score: 93
  • Evalue 1.70e-16
flagellar hook-basal body complex subunit FliE; K02408 flagellar hook-basal body complex protein FliE similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 79
  • Evalue 8.10e-13
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 79
  • Evalue 3.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kineococcus radiotolerans → Kineococcus → Kineosporiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGTCGATCCCCATTGCTCCCATCGGTTCGATCGCGCCGCTCGCCGGCTTCGGCGGCGTCTCGCCCACCGGCTATGACGCCTCCCTCGGCGGCTCCGCCGCCGCGAGCAACGTCATGCCCGTCGGAGGAAGCGGCACCGGAGCCGATTTCGCCAGCGCCCTGGCCAACGGCTTCGACGCGGTGCAGGCCGCGCAAACCGACGCGAACCAGCTCGCCGTACAGGCGGCCACGGGCCAGCTCGTGGATCCGGCGCAGCTGACCATCGCCACCACCAAGGCACAGCTGATGACGCAGATGGCGTCCGCGATCCAGTCGAAGGCCGTCACCGCGTTCAACACGATCATGTCGATGCAGGCATAA
PROTEIN sequence
Length: 120
VSIPIAPIGSIAPLAGFGGVSPTGYDASLGGSAAASNVMPVGGSGTGADFASALANGFDAVQAAQTDANQLAVQAATGQLVDPAQLTIATTKAQLMTQMASAIQSKAVTAFNTIMSMQA*