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scnpilot_solids1_trim150_scaffold_378_curated_62

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(69177..69884)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QYT9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 234.0
  • Bit_score: 377
  • Evalue 9.00e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 234.0
  • Bit_score: 377
  • Evalue 1.30e-101
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 234.0
  • Bit_score: 374
  • Evalue 1.80e-101

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Taxonomy

Gordonia effusa → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAAGCGCAGCAAGTCGTATCGCGCGGCCGCCGAGAAGATCGACCGCAGCAAGCTGTACACCCCGATCGAGGCCGTTCAGCTAGCCAAGGACACCTCCGTCGGCAAGTCCGATGCCACCGTCGAGGTCGCGCTCGTGCTGGGCGTCGACCCGCGCAAGGCGGACCAGATGGTGCGCGGCACCGTCAACCTGCCGCACGGCACCGGCAAGACCGCGCGCGTCATCGTGTTCGCGGTCGGCGAGAAGGCCGCCGAGGCGGAGGCCGCCGGCGCGGATGCCGTGGGCGCCGAGGATCTGATCGAGAAGATCCAGGGCGGATGGCTCGACTTCGACGCGGCGATCGCCACACCGGACCAGATGGCCAAGGTCGGCCGGATCGCGCGGGTCCTGGGTCCCCGCGGTCTGATGCCGAACCCGAAGACCGGCACGGTGACGCCGGACGTGGCCAAGGCCGTGGCAGACATCAAGGGCGGCAAGATCAACTTCCGCGTGGACAAGGCCGCCAACCTGCACCTGATCATCGGCAAGGCGTCGTTCTCCGCCGAGCAACTGGCGCAGAACTACATGGCGGCGCTCGATGAAGTGCTCCGCGCCAAGCCGTCCGCGTCCAAGGGCCGGTACATCAAGAAGGGCGTCGTGACGACCACGATGGGCCCGTCGGTGCCGCTGGACACCGCGGTGACCAAGCTCGCCGCCGCGGAGGCCTGA
PROTEIN sequence
Length: 236
MKRSKSYRAAAEKIDRSKLYTPIEAVQLAKDTSVGKSDATVEVALVLGVDPRKADQMVRGTVNLPHGTGKTARVIVFAVGEKAAEAEAAGADAVGAEDLIEKIQGGWLDFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVAKAVADIKGGKINFRVDKAANLHLIIGKASFSAEQLAQNYMAALDEVLRAKPSASKGRYIKKGVVTTTMGPSVPLDTAVTKLAAAEA*