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scnpilot_solids1_trim150_scaffold_1425_curated_13

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 11998..12681

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Rhodococcus sp. DK17 RepID=UPI00030A085F similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 205.0
  • Bit_score: 96
  • Evalue 3.90e-17
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETT27840.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 210.0
  • Bit_score: 103
  • Evalue 4.40e-19
transcriptional regulator, tetR-family similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 191.0
  • Bit_score: 91
  • Evalue 5.10e-16

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Taxonomy

Rhodococcus rhodochrous → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCTGATCATCGAGACGGCGGCCACGGAGTTCGCCGAACGGGGGTATGACGGCGTCTCGCTCAACGCCCTCGTCGAGGCCAGCGGCGTGAGCAAGGGCGCCTTCTACTTCCACTTCTCCTCCAAGGAAGAGCTGGCGCTGGCGGCGTTCCTCGCTAAACAGCACGAACTGCTCGGTCGCCTGGCTTCGAACGACCATCCACCGGAGGAGCCCGCCGCCGATCAGTTGGCCCGAATGCTGCGTCTTCGCAACCAGCTGCTGGCCGCGGATCGCTCGCTGGCATGTGTCACCCGGCTCGGCAACGAGATGACCGCACGCTCTGCCCCCGGATCGCCATACGCCGCCTCCCAGGCGGCCGCCGTCGGGCTCATCGCGGAAATCATCGAAACCGGCCGGCGCCGCCACGAGTTCCGGCCCGAACTCGATCCGCACGCAACGGCGCAGGCGATATTCGCGTGGGTTGTCGGCATCGACGCCCTGTCCCTGTCCACCTCCGACGGCAAGGACCTGGAGGAGCGGAGCGACGAGATGCTCGCCCTGTTGCTGCCCGCGCTGCTCGCCGAGCCCCGCGCCGGCGGGGGCGTCGCCAAGAATGCTCAGCGATCGCGACCACCAGTCGCACCCGGCGCCGCAGCGACGCGCCGCACCGGAACAGAAGACGGAGGTTCCCATGACCGACAGTGA
PROTEIN sequence
Length: 228
MLIIETAATEFAERGYDGVSLNALVEASGVSKGAFYFHFSSKEELALAAFLAKQHELLGRLASNDHPPEEPAADQLARMLRLRNQLLAADRSLACVTRLGNEMTARSAPGSPYAASQAAAVGLIAEIIETGRRRHEFRPELDPHATAQAIFAWVVGIDALSLSTSDGKDLEERSDEMLALLLPALLAEPRAGGGVAKNAQRSRPPVAPGAAATRRTGTEDGGSHDRQ*