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scnpilot_solids1_trim150_scaffold_142_curated_9

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(9450..13001)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative relaxase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DYJ9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 999.99
  • Bit_score: 1894
  • Evalue 0.0
Conjugal transfer protein {ECO:0000313|EMBL:EWT07836.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 999.99
  • Bit_score: 1906
  • Evalue 0.0
putative conjugative relaxase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 999.99
  • Bit_score: 1845
  • Evalue 0.0

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3552
GTGACGGTTTCGATGCGCGTGATGTCTGCGGGTGATGGCTACAAGTACCTGTTGAGGTCCATCGCAGCCGGCGACGGCGATCGCTCTCTGTCGACCCCGCTGACTCGCTACTACGCGGAGGCGGGGAACCCGCCGGGGTTCTGGATCGGCCAGGGCCTCGCCTCGCTTGGGGACGGAGAACTGGCCCCAGGAGCGCAGGTCTCGGAGGCCCAGCTCCAGCTCTTGATCGGGATGGGGCACGACCCGATCACCGGCGACCCGCTCGGACGCTCCTACCAGCAGTTCGCGCCGGTCGCGGAGCGGGTCGAGCAGCGCGTGAATGACGTGAACCCCGAGCTGGGGCCGGCGGCGCGGGCGCGAGAGATAGCCGCGATCGAGGCTGAGGAAGCCGAGCGTGGCACCCGCCGAGCGGTCGCGGGCTACGACTTCACGTTCAGCGTCCCGAAGTCCGTCTCAGCCATCTGGGCGGTAGCAGACGCGGGCACGCAATCATTGATCGCAGACGCGCATCACGCGGTGGTTGCAGAGCTGGTTGCGTTCCTCGAACGTGAGGTTGCAGCAACCCGCGTCGGTGCAGCCGGCCCGGACGGTGCAGTGGCGCACGTCGATGTCACCGGCGTCTCGGCGGCGGCGTTCGATCACTACGACTCCCGTTCCGGCGACCCTCAGTTGCACACGCACGTCGTCATCAGCAACAAGGTGATAACCACACAGGACGGTAAGTGGCGGACCCTCGCGGGCCGACCGATGCACTCCGCGGTCGTCGCTGTCTCCGAGCTCTACAACGCCGCGCTGGCCGACCAGTTGACCCGCACTCTCGGCGTGGGATGGGAGGCGAGGGATCGTGGCCGGGACCGGAACCCTGCCTGGGAAATCGAAGGCGTCCCGGATGAGCTGGTGACCGAGTTCTCCACCCGTACCCGCTATATCGAGGCCGAGAAAGACCGGCTGATCGCCGAATACGTCGCCCGCCACGGCCGCCAACCCTCCGCCCGGACTGTGGTGAAACTGCGGGCGTGGGCGACCCTTGCGACCCGCCCGGATAAGCAGATCAGATCGCTGGCCGACCTCACCTCCGAATGGCGGCAACGCGCCAGCCGTGTACTCGGCCGGGACGCGACCCGATGGGCGCGCGGCATGGTCGGCGGTGACGAGCTGCGGCGGGTGCTGCGGGCCGACGATGTGCCGCTGGATACAGTGCGCGAGGCCGGGCAGTCCGTGACGGATACGGTCGGGGAGAAGCGGTCGACCTGGACCCGGTGGAACCTGCACGCCGAAGCATCCCGGCAGTTGATGGGCTGGCGGTTTGCCAGCATCGAAGACCGGGAGGCAATCACTGGCTTGGTGGTCGATGCGGCCGAGCGCGCCTCGCTGCGGCTCACCCCGCCCGAACTGGCGTCGAGCCCGGTGCAGTTCCGCCGGCCCGATGGCAGCACCCGCTTCCGCCCACACGCCTCCACACTGTTCTCATCCGAAGCCCTGTTGGAGGCCGAAGACCGTCTCCTGGCCCGCGCCGCCGACACCACCGGCCCGGCCATCTCGCTGGAAACGGTCGAGAAGATCACTGTCCGGCCCGATGCGCAGGGCCGGGTACTCAGTGATGACCAGGCCGCTGCCCTCGCCGTGGTCGCCATCTCCGGCCGGGTCGTGGACGTTCTGGTCGGCCCGGCCGGCGCCGGGAAGACCACCGCCATGTCGGCGTTGCGGCGGGCCTGGGAGACCGAACACGGCGCCGGGTCCGTGGTCGGGCTCGCCCCGTCCGCGGTCGCCGCGCAGGTCCTCGCCGACGATCTGGGGATCGCAACGGAGAACACGGCGAAGTGGTGGCAGGACCATCTCATGCACGGCGCCACCTTCACCGGCGGGCAGCTCGTCATCGTCGACGAAGCATCTCTGGCCGGCACCGCGTCCTTGGACCGCATCATCGCTGAGGCTGAGCAGGCCGGGGCGAAGGTGTTGCTCGTCGGAGACTGGGCGCAACTCCAGTCCGTCGATGCCGGCGGCGCCTTCGCGATGCTCGTGCACGGTCGAGACGATGCCCCCGAGTTGACTGACCTGCATCGCTTCACTCGCGCCTGGGAGAAGACGACCTCGATCCAGCTCCGCCACGGCCGCACCGAGGCGATCGACACCCTCATCGAGCACGGCCGGATCACCGGCGGCGACACCGAAGCGATGATCGACGCCGCCTACACCGCCTGGCAGTACGACCTCGCCGAAGGACTCGGTTCGATCCTGGTCGCTGAAACCCACGAGACCGTCACCACCCTCAACACAAGGGCACGGGCGGACCGGATCATCGACGGCGCCGTCAACGCCGCGCGTGAGGTCGCTCTGCACGACGGCACCGCCGCGTCGGCGGGCGATCTGGTCATCACCCGCCACAACGACCGGCGCCTGCGCAACGGGAGGCGGTGGGTCCGCAACGGCGACCGCTGGGCCGTGACCGGCGTGCGTGAGGATGGATCAGTGAGCATCCGCCCCGCCGGGCGCCGGTTCGGCGGCGGTCTCGTCCTACCCGCCGACTACGTGGCCGAACACCTCGACCTGGGCTATGCGATCACCGCCCACCGTGCCCAAGGGGTCACCGCCGACACGACGCACGTCGTCGTCACCGCAACGACCACGCGGGAGAACTTCTACGTCGCCATGACCCGCGGCGCCGAGAGCAACCACGCCTACGTCGCGGTTGACAGGCCCGACGATGCCCACTCCGTGCCGCACCCCGGCGACGACCCCGGCGCGAGCGCCCGCTCGGTGTTGTATGGGGTGTTGCAGCACGTCGGCGCTGAACTGTCGGCGCACGGGACGATCACCGCCGAACAAGAACACTGGGGCAGCCTCGTCCAGCTCGCCGCCGAGTACGAGACGATCGCCCAAGCCGCGCAACACGATCGCTGGACCACCCTGCTCGCGACCGCCGGCCTCACCAGCGAGCAGGTCGACGCGGTGCTGGATTCCGACGCTTACGGCGCGCTGTCCGCCGAACTCCGCCACGCTGAAGCCAACCACCACGACATCGACACCCTGCTGCCGCGACTCATCAGCTCACGCAGCCTGGGGGACACCGACGACATCGCCGCCGTCCTGCACGCCCGTCTCGCCCGAGCCACCGCCCGCCCGGCCGGGTCCGGGCGCACCCGCAAGCCACCCCGCCTCATCGCCGGCCTGATCCCAGAAGCCGGTGGACCGATGACAGGCGACATGCGCCAAGCCCTGGACGAGCGGCGCGAGCTGATCGAACAACGCGCCGACGCCGTGCTCACCAGCGCGCTCGCTGACCAGGAGCCGTGGACGGTCCGGCTCGGCCAGCCGTCCAGCGACAAGAAGCAATACGCCTTGTGGAAGCGCGCCGCTCGCACCGTCGCCGCCTACCGTGACCGCTACCAGATCACCGATGATCGTGACCCGCTCGGCCACGTACCCGAGAGCACCAGCCAGAAAATCGACGCCGCCAGGGCCCGGACCGCGCTCCGAGCACTTGATGTCGGCCCATCGTGGGAGAACGAACGTAGGGCGACACCGACACCGACCCGCGGTCTCCAAGTCTGA
PROTEIN sequence
Length: 1184
VTVSMRVMSAGDGYKYLLRSIAAGDGDRSLSTPLTRYYAEAGNPPGFWIGQGLASLGDGELAPGAQVSEAQLQLLIGMGHDPITGDPLGRSYQQFAPVAERVEQRVNDVNPELGPAARAREIAAIEAEEAERGTRRAVAGYDFTFSVPKSVSAIWAVADAGTQSLIADAHHAVVAELVAFLEREVAATRVGAAGPDGAVAHVDVTGVSAAAFDHYDSRSGDPQLHTHVVISNKVITTQDGKWRTLAGRPMHSAVVAVSELYNAALADQLTRTLGVGWEARDRGRDRNPAWEIEGVPDELVTEFSTRTRYIEAEKDRLIAEYVARHGRQPSARTVVKLRAWATLATRPDKQIRSLADLTSEWRQRASRVLGRDATRWARGMVGGDELRRVLRADDVPLDTVREAGQSVTDTVGEKRSTWTRWNLHAEASRQLMGWRFASIEDREAITGLVVDAAERASLRLTPPELASSPVQFRRPDGSTRFRPHASTLFSSEALLEAEDRLLARAADTTGPAISLETVEKITVRPDAQGRVLSDDQAAALAVVAISGRVVDVLVGPAGAGKTTAMSALRRAWETEHGAGSVVGLAPSAVAAQVLADDLGIATENTAKWWQDHLMHGATFTGGQLVIVDEASLAGTASLDRIIAEAEQAGAKVLLVGDWAQLQSVDAGGAFAMLVHGRDDAPELTDLHRFTRAWEKTTSIQLRHGRTEAIDTLIEHGRITGGDTEAMIDAAYTAWQYDLAEGLGSILVAETHETVTTLNTRARADRIIDGAVNAAREVALHDGTAASAGDLVITRHNDRRLRNGRRWVRNGDRWAVTGVREDGSVSIRPAGRRFGGGLVLPADYVAEHLDLGYAITAHRAQGVTADTTHVVVTATTTRENFYVAMTRGAESNHAYVAVDRPDDAHSVPHPGDDPGASARSVLYGVLQHVGAELSAHGTITAEQEHWGSLVQLAAEYETIAQAAQHDRWTTLLATAGLTSEQVDAVLDSDAYGALSAELRHAEANHHDIDTLLPRLISSRSLGDTDDIAAVLHARLARATARPAGSGRTRKPPRLIAGLIPEAGGPMTGDMRQALDERRELIEQRADAVLTSALADQEPWTVRLGQPSSDKKQYALWKRAARTVAAYRDRYQITDDRDPLGHVPESTSQKIDAARARTALRALDVGPSWENERRATPTPTRGLQV*