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scnpilot_solids1_trim150_scaffold_142_curated

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_142_curated_1
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57..212)
DNA (156bp) protein (52aa)
Transposase n=4 Tax=Mycobacterium canettii RepID=L0PWD4_9MYCO
Transposase (fragment)
Transposase, IS21 family protein {ECO:0000313|EMBL:CCC44445.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
scnpilot_solids1_trim150_scaffold_142_curated_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(487..1506)
DNA (1020bp) protein (340aa)
ATPase n=1 Tax=Rhodococcus opacus RepID=UPI00029CB277
Uncharacterized protein {ECO:0000313|EMBL:AHK29117.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
ATPase
scnpilot_solids1_trim150_scaffold_142_curated_3
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1804..3309
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036F8EE6
Transposase DDE domain protein {ECO:0000313|EMBL:EUA10860.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
transposase
scnpilot_solids1_trim150_scaffold_142_curated_4
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3952..6402)
DNA (2451bp) protein (817aa)
SMC domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1A8_POLGS
Chromosome segregation protein SMC {ECO:0000313|EMBL:KGJ03460.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
SMC domain-containing protein
scnpilot_solids1_trim150_scaffold_142_curated_5
unknown

Not on your lists

comp(6399..6578)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_142_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6686..7030)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002FF2FBC
Uncharacterized protein {ECO:0000313|EMBL:CDK01599.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_7
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7413..8234
DNA (822bp) protein (274aa)
DNA protecting protein DprA n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E393_9MICO
DNA-binding protein {ECO:0000313|EMBL:EWT07837.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
smf family protein; K04096 DNA processing protein
scnpilot_solids1_trim150_scaffold_142_curated_8
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8249..9379)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5C808_MICLC
Uncharacterized protein {ECO:0000313|EMBL:CEH03558.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9450..13001)
DNA (3552bp) protein (1184aa)
Conjugative relaxase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DYJ9_9MICO
Conjugal transfer protein {ECO:0000313|EMBL:EWT07836.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
putative conjugative relaxase
scnpilot_solids1_trim150_scaffold_142_curated_10
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13210..14451
DNA (1242bp) protein (414aa)
putative modification methylase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TIN3_9ACTO
Putative modification methylase {ECO:0000313|EMBL:GAB33341.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
scnpilot_solids1_trim150_scaffold_142_curated_11
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14625..14930
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WB47_KINRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS04036.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
scnpilot_solids1_trim150_scaffold_142_curated_12
unknown

Not on your lists

16563..17258
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000366A651
scnpilot_solids1_trim150_scaffold_142_curated_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17411..20002)
DNA (2592bp) protein (864aa)
Sensory box/GGDEF domain/EAL domain protein {ECO:0000313|EMBL:EWM10672.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Uncharacterized signaling protein PA1727 id=3868561 bin=GWC2_Syntrophus__56_31 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20439..21845)
DNA (1407bp) protein (469aa)
Phytochrome-like protein cph2 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B50309
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43419.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids1_trim150_scaffold_142_curated_15
unknown

Not on your lists

22145..22342
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_142_curated_16
Corynebacterium lipophiloflavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22640..23029)
DNA (390bp) protein (130aa)
Transcriptional regulator, MerR family n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XPU8_9CORY
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEI17679.1}; TaxID=525263 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium lipophiloflavum DSM 44291.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_17
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23428..24477
DNA (1050bp) protein (350aa)
mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0AW65_ARTS2
Mercuric reductase {ECO:0000313|EMBL:ABK05635.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_142_curated_18
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24557..25708)
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SBD1_MICSL
integral membrane sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_142_curated_19
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25693..26385)
DNA (693bp) protein (231aa)
chemotaxis protein CheY n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B395C8
PhoR family transcriptional regulator {ECO:0000313|EMBL:EWT07748.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_142_curated_20
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26512..26742
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X1X5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB98347.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein; K08982 putative membrane protein
scnpilot_solids1_trim150_scaffold_142_curated_21
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26791..28359
DNA (1569bp) protein (523aa)
CopA protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E0Q1_9MICO
CopA protein {ECO:0000313|EMBL:CCH69240.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
Multicopper oxidase type 3
scnpilot_solids1_trim150_scaffold_142_curated_22
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28356..29222
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E2Y1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH74819.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_23
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29272..29796
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7R5C1_JONDD
Uncharacterized protein {ECO:0000313|EMBL:AIY03447.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_142_curated_24
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29899..30378)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037BC63C
Uncharacterized protein {ECO:0000313|EMBL:EMR00139.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
scnpilot_solids1_trim150_scaffold_142_curated_25
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30375..31703)
DNA (1329bp) protein (443aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JPE7_SACES
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CCH28570.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_solids1_trim150_scaffold_142_curated_26
unknown

Not on your lists

comp(31963..32451)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_142_curated_27
unknown

Not on your lists

32617..33063
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_142_curated_28
unknown

Not on your lists

33060..33719
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_142_curated_29
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33892..34314
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1H7_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30165.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids1_trim150_scaffold_142_curated_30
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34417..34635
DNA (219bp) protein (73aa)
Heavy metal transport/detoxification protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCT3_CELFN
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADG76318.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying items 1-30 of 98 in total

View Taxonomy