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scnpilot_solids1_trim150_scaffold_2442_curated_22

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(21579..21917)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035D0441 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 98.0
  • Bit_score: 94
  • Evalue 9.50e-17
Uncharacterized protein {ECO:0000313|EMBL:AIJ21064.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 98.0
  • Bit_score: 82
  • Evalue 5.30e-13

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAAGCAGATGACGACGCGCGTGTCAGAAAGCCTGCTCGAGCGAATCCGGCGCGGCGCCGAGGAGCGCAGAATCAGCATCAACGAATTCGTCACCCGCACGATGGACGCTGCCACCGACCCGGAGTTGGAAGGTTCGGAGGCCGAGCGGCTCCGCGCCCGGCTCGAAGCCGCGGGGTTGACGGTGCTGCCTGCGACCTCAGATCGCGTTCGCCCGCCGCGAGAGGCCTTGCAGGCGGCGCGGCGCGCGGCTGGCCGCGGAACACCGCTCTCGGACATCGTGAGCGCTGACCGCNNNNNNNNNNCGCGGAACACCGCTCTCGGACATCGTGAGCGCTGA
PROTEIN sequence
Length: 113
MKQMTTRVSESLLERIRRGAEERRISINEFVTRTMDAATDPELEGSEAERLRARLEAAGLTVLPATSDRVRPPREALQAARRAAGRGTPLSDIVSADRXXXXRNTALGHRER*