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scnpilot_solids1_trim150_scaffold_2442_curated

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2442_curated_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132..1358)
DNA (1227bp) protein (409aa)
Glycogen synthase {ECO:0000313|EMBL:KJL31153.1}; EC=2.4.1.11 {ECO:0000313|EMBL:KJL31153.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI00034D429A
glycosyl transferase
scnpilot_solids1_trim150_scaffold_2442_curated_2
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1711..1965
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QRQ3_9MYCO
Conserved protein of unknown function, possible antitoxin
Antitoxin VapB30 {ECO:0000313|EMBL:KAX84909.1}; TaxID=1448632 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis M1034.;"
scnpilot_solids1_trim150_scaffold_2442_curated_3

Not on your lists

1965..2351
DNA (387bp) protein (129aa)
PilT protein domain protein n=2 Tax=mine drainage metagenome RepID=T1A8X2_9ZZZZ
PilT protein domain protein {ECO:0000313|EMBL:EQD53467.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PilT protein domain-containing protein
scnpilot_solids1_trim150_scaffold_2442_curated_4
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2381..4636)
DNA (2256bp) protein (752aa)
N-acylneuraminate-9-phosphate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
NeuB family / SAF domain / AP endonuclease, family 2 multi-domain protein n=2 Tax=Rothia aeria RepID=I0UT18_9MICC
Acetylneuraminic acid synthetase {ECO:0000313|EMBL:KHL05019.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids1_trim150_scaffold_2442_curated_5
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4832..5074
DNA (243bp) protein (81aa)
CopG family transcriptional regulator n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z213_MYCSD
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AEF37013.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
scnpilot_solids1_trim150_scaffold_2442_curated_6
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5071..5487
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
Ribonuclease VapC n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z214_MYCSD
hypothetical protein; K07062
scnpilot_solids1_trim150_scaffold_2442_curated_7
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5571..6269)
DNA (699bp) protein (233aa)
CMP-N-acetylneuraminic acid synthetase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
Cytidylyltransferase n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1Q4K9_9ACTO
Cytidylyltransferase {ECO:0000313|EMBL:ERH17129.1}; TaxID=1321817 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii F0530.;"
scnpilot_solids1_trim150_scaffold_2442_curated_8
Rothia dentocariosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6266..7141)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) RepID=E3H5V0_ROTDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP40880.1}; TaxID=762948 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA).;"
scnpilot_solids1_trim150_scaffold_2442_curated_9
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7309..8304)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R560_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EET74937.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2442_curated_10
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8301..9362)
DNA (1062bp) protein (354aa)
epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD dependent epimerase/dehydratase family protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B8F1_9MICO
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFP58654.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
scnpilot_solids1_trim150_scaffold_2442_curated_11
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9359..9907)
DNA (549bp) protein (183aa)
Acetyltransferase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NP50_ROTMD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:BAI65418.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
scnpilot_solids1_trim150_scaffold_2442_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9904..11139)
DNA (1236bp) protein (412aa)
glycosyl transferase family 1 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B42F4D
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDK01883.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_2442_curated_13
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11197..11685)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZGS5_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME66512.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2442_curated_14
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11882..13696)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XXY5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01020.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
ABC transporter ABC/membrane protein
scnpilot_solids1_trim150_scaffold_2442_curated_15
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13855..15618
DNA (1764bp) protein (588aa)
putative transcriptional regulator with HTH domain; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Predicted transcriptional regulator with HTH domain n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MHQ7_BRAFD
Predicted transcriptional regulator with HTH domain {ECO:0000313|EMBL:ACU86574.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
scnpilot_solids1_trim150_scaffold_2442_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15664..17139)
DNA (1476bp) protein (492aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDJ98894.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CDJ98894.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037A795F
dTDP-4-dehydrorhamnose reductase
scnpilot_solids1_trim150_scaffold_2442_curated_17
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17149..17562)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JF57_9GAMM
PilT domain-containing protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
scnpilot_solids1_trim150_scaffold_2442_curated_18
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17653..17898)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) RepID=D0LE29_GORB4
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
scnpilot_solids1_trim150_scaffold_2442_curated_19
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18061..19833
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E4M0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH77038.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
HNH endonuclease
scnpilot_solids1_trim150_scaffold_2442_curated_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20076..21086)
DNA (1011bp) protein (337aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rfbB; dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J3_9MICO
scnpilot_solids1_trim150_scaffold_2442_curated_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21138..21572)
DNA (435bp) protein (145aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626221
scnpilot_solids1_trim150_scaffold_2442_curated_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21579..21917)
DNA (339bp) protein (113aa)
transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035D0441
Uncharacterized protein {ECO:0000313|EMBL:AIJ21064.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_solids1_trim150_scaffold_2442_curated_23
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21942..22319)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Gordonia polyisoprenivorans RepID=UPI0003601A96
Uncharacterized protein {ECO:0000313|EMBL:CCH69568.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2442_curated_24
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22358..22741)
DNA (384bp) protein (128aa)
DNA-binding protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V242_9MICC
DNA-binding protein {ECO:0000313|EMBL:EMY34152.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
nucleotidyltransferase; K07075
scnpilot_solids1_trim150_scaffold_2442_curated_25
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22855..23727)
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dTDP-glucose pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
glucose-1-phosphate thymidylyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CB787
scnpilot_solids1_trim150_scaffold_2442_curated_26
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23724..24719)
DNA (996bp) protein (332aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00038098FA
scnpilot_solids1_trim150_scaffold_2442_curated_27
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24975..25490)
DNA (516bp) protein (172aa)
anhydrase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287E5DE
Anhydrase {ECO:0000313|EMBL:EWT07444.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
carbonic anhydrase
scnpilot_solids1_trim150_scaffold_2442_curated_28
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25619..26980
DNA (1362bp) protein (454aa)
N-formimino-L-glutamate deiminase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HBJ5_STRA9
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EXU85282.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
formiminoglutamate deiminase
scnpilot_solids1_trim150_scaffold_2442_curated_29
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27163..29700)
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQW5_MICPN
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36987.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_2442_curated_30
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29700..30455)
DNA (756bp) protein (252aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F676
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:AEE46655.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Displaying items 1-30 of 52 in total

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