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scnpilot_solids1_trim150_scaffold_2442_curated_37

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(37981..38967)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVX1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 278.0
  • Bit_score: 318
  • Evalue 9.00e-84
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT00907.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 288.0
  • Bit_score: 324
  • Evalue 2.30e-85
extracellular solute-binding protein family 3 protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 282.0
  • Bit_score: 314
  • Evalue 3.10e-83

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGCCCTGCGTCGTTCCGCCCGCCTCGCCGCCGCCGGGGCAGCCGCCCTGCTGCTGGCCACCACCGTCCTGGCCGGCTGCGGGTCCAGCAGCGACAGCGCGGGGGCCTCCGGCGAGACCTCGACGGCAAGCAGCATGGCGGAAAGCAGCACGGCGACTGGCCAGTCGAGCGGCGAATCGGCAGCCGAGTCCAGCTCGCAGCAATCCTCCGCCGAGTCGAGCGCCGCCGACACGTCGTGCGACGCGGCGACTCTCGCAACGAAGACGCCGGGTACGCTCACCATCGCCACCGACGAGCCGGTGTACGAACCGTGGTTCGTGGACAACGACCCGAGCAACGGGAAGGGCTTCGAGTCCGCCGTCGCGTACGCCGTGGCACAGCAGCTCGGATTCGCCACGGACAAGGTCACCTGGGTGCGCGCCGGGTTCGACGCGGTGATCTCGCCGGCACCGAAGAACTTCGACTTCGACATCAACGAGTTCTCCATCACCCCGGACCGCGCCAAGGTCGTGGACTTCTCGACCGGCTACTACGACGTCGCCCAGGCCATCGTCACCACCGCCGACTCGACAATCGCCGGCGCGACCGGCATCAAAGACCTGAAGGGCGCGACCCTCGGCGCCATGATCGGCACCACCAGCCTGGCGGCGATCGACGCCGCCATACAGCCGACCAACAAGCCGGCCGTGTTCAACACCAACGACGACGCGGTGAAGGCGCTGCAGAACGGCCAGATCGACGGCGTCGTCACCGATCTGCCCACGGCGTTCTACATGGCCGGCGCGCAGCTCGACAACGGCAAGGTCATCGGTCAGCTGCCCGCCACCACCGGCGGCGACGTGGAGCAGTTCGGCCTGCTGCTGGAGAAGGGGTCGCCGATCACCGGCTGCGTCTCGTCCGCGGTGGACGCGCTGCGCGCCGACGGAACGCTGGGCGACCTCGCCACGCAGTGGCTGGCCGAAGCCGGCGCCCCCGAACTGAAGTAA
PROTEIN sequence
Length: 329
MALRRSARLAAAGAAALLLATTVLAGCGSSSDSAGASGETSTASSMAESSTATGQSSGESAAESSSQQSSAESSAADTSCDAATLATKTPGTLTIATDEPVYEPWFVDNDPSNGKGFESAVAYAVAQQLGFATDKVTWVRAGFDAVISPAPKNFDFDINEFSITPDRAKVVDFSTGYYDVAQAIVTTADSTIAGATGIKDLKGATLGAMIGTTSLAAIDAAIQPTNKPAVFNTNDDAVKALQNGQIDGVVTDLPTAFYMAGAQLDNGKVIGQLPATTGGDVEQFGLLLEKGSPITGCVSSAVDALRADGTLGDLATQWLAEAGAPELK*