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scnpilot_solids1_trim150_scaffold_1081_curated_19

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(19284..20555)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F15F6 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 397.0
  • Bit_score: 431
  • Evalue 1.20e-117
Uncharacterized protein {ECO:0000313|EMBL:AIJ23606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 396.0
  • Bit_score: 423
  • Evalue 4.70e-115
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 392.0
  • Bit_score: 416
  • Evalue 1.30e-113

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGAGCGAGCGGGACCGGACGAACCCGGGGGCGGCGTCATACCCGTCGTCGGGAGGCGGGAGCGGCGCGGGTTCCAGCGCGGACACCCTCACGGCGATCCGGCTGATCGCCGGGCGTGAACTGACCACCCGGCTGCGCAGCAAGGCGTTCCGGGTGATGACGGCGATCGTGCTGCTGGTGATCATCGGCACCGTGCTGGCCTTCCACCTGCTGCCGGGGATCGGCTCCGGCGGCTCGAAAGTCGGTGTGCTGCAAGCGGACGCCGCGTTGACGCAGCAGATCACGTCTGCGGCAGACGCGGTCGGCGCCCACGTCGACACCGTGCCGGTCGCCGATGAGGCCGCCGGCCGCACCCGGGTGGCCGACGGTACCCTCGATGCCCTGGTGATCCCACGGGAGAGCGGCCGGCTCCAAGTGGTCGTGCAGTCGGAACTCGACCCCGCGCTGCAGACGGCATTGATCGTAGCTTCACGAAACCTGGTTCAGGACAAGGCGATTCGCGCGCTCGGCGGTGACCCGGCCGAGGTCAATGCGGCGATCGCACAGGCTGGTGTGGTCGTCGATCCGATCAAACCGCCCAAGCAGTACGACGTGCAGCAGTTGGTGCTGGGCGCCGCCGCGGGCATCCTGATCTATCTGTCGCTGATGATCGGCGGGCAACTGGTGGCGCAAGGAGTGGTCGAGGAGAAGTCCAGCCGCGTCGTCGAGCTGCTGCTCGCAACCGTGCGGCCGTGGGAACTGATGGTCGGCAAGGTGCTGGGGATCGGTGCGCTGGGCATGATCCAGATCGTGCTGTACGGCGTCGTCGGCGTGGGGCTGTCGAGTGCGCTGGGCACGCTGACCCTGTCGGTGGGTTCCGCAGTGGGCACAGTGATCTGGCTGATCGTCTGGTACCTGGTGGGGTTCGTGATGTACGCGTTCGCGTTCGCGGCGGCCGGTGCCCTGGTCTCGCGCATGGAGGACGCCTCCGGCGTGATCATGCCGATCACCAGCTTCGTGATCGTCGGCTACGTGGTGGGCATCTCGGTGCTGCCGTCGGATCCGTCCAACTCGTTCGCCGAGGTGCTGTCGATCATCCCGCTGTTCGCACCCACTCTGATGCCGATGCGGCTGGCCATGGGCGGTGTGCCCGTGTGGGAGGCGGTGATGTCGCTGCTGCTCGCGCTGGCCACGATCCCGCTGTTGGCGGCGCTGGCCGGACGGATCTACCGCAACGCCGTGATCCACATCGGGTCCCGGGTGCCGCTGCGCAAGGCGCTCGCCCGCGGGTAG
PROTEIN sequence
Length: 424
MSERDRTNPGAASYPSSGGGSGAGSSADTLTAIRLIAGRELTTRLRSKAFRVMTAIVLLVIIGTVLAFHLLPGIGSGGSKVGVLQADAALTQQITSAADAVGAHVDTVPVADEAAGRTRVADGTLDALVIPRESGRLQVVVQSELDPALQTALIVASRNLVQDKAIRALGGDPAEVNAAIAQAGVVVDPIKPPKQYDVQQLVLGAAAGILIYLSLMIGGQLVAQGVVEEKSSRVVELLLATVRPWELMVGKVLGIGALGMIQIVLYGVVGVGLSSALGTLTLSVGSAVGTVIWLIVWYLVGFVMYAFAFAAAGALVSRMEDASGVIMPITSFVIVGYVVGISVLPSDPSNSFAEVLSIIPLFAPTLMPMRLAMGGVPVWEAVMSLLLALATIPLLAALAGRIYRNAVIHIGSRVPLRKALARG*