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scnpilot_solids1_trim150_scaffold_1081_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1081_curated_1
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
molybdate-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B30B21
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93688.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ABC-type molybdate transport system, periplasmic component
scnpilot_solids1_trim150_scaffold_1081_curated_2
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(608..1000)
DNA (393bp) protein (131aa)
MerR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF085
MerR family transcriptional regulator {ECO:0000313|EMBL:KFF58876.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
molybdenum-pterin-binding protein
scnpilot_solids1_trim150_scaffold_1081_curated_3
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1077..2228)
DNA (1152bp) protein (384aa)
Diguanylate cyclase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2G1T0_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:AJD49519.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
diguanylate cyclase with hemerythrin-like metal-binding domain protein
scnpilot_solids1_trim150_scaffold_1081_curated_4
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2438..3550)
DNA (1113bp) protein (371aa)
LysR family transcriptional regulator n=1 Tax=Streptomyces scabrisporus RepID=UPI000371FDAF
LysR family transcriptional regulator {ECO:0000313|EMBL:EDY54583.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1081_curated_5
unknown

Not on your lists

3678..3947
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1081_curated_6
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4107..4958)
DNA (852bp) protein (284aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
carbon-monoxide dehydrogenase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B0CC
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KEI45426.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
scnpilot_solids1_trim150_scaffold_1081_curated_7
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4955..7357)
DNA (2403bp) protein (801aa)
carbon monoxide dehydrogenase large subunit (EC:1.2.99.2)
Carbon monoxide dehydrogenase large subunit {ECO:0000313|EMBL:ABG96757.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ABG96757.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
aldehyde dehydrogenase n=1 Tax=Ruania albidiflava RepID=UPI0003B6C78C
scnpilot_solids1_trim150_scaffold_1081_curated_8
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7354..7833)
DNA (480bp) protein (160aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
carbon monoxide dehydrogenase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000378321F
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:EWT06765.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
scnpilot_solids1_trim150_scaffold_1081_curated_9
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8105..9148
DNA (1044bp) protein (348aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Glaciibacter superstes RepID=UPI0003B79144
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
scnpilot_solids1_trim150_scaffold_1081_curated_10
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9433..11739)
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B32DFA
Dehydrogenase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:EMQ96664.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
molybdopterin-dependent oxidoreductase subunit alpha
scnpilot_solids1_trim150_scaffold_1081_curated_11
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11736..12596)
DNA (861bp) protein (287aa)
formate dehydrogenase accessory protein FdhD n=1 Tax=Glaciibacter superstes RepID=UPI0003B70048
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
formate dehydrogenase family accessory protein FdhD
scnpilot_solids1_trim150_scaffold_1081_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12831..13994)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X823_NAKMY
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Uncharacterized protein {ECO:0000313|EMBL:ACV81026.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1081_curated_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13987..15177)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ATM8_RHOOB
hypothetical protein; K07161
Uncharacterized protein {ECO:0000313|EMBL:BAH53292.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids1_trim150_scaffold_1081_curated_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15197..16192)
DNA (996bp) protein (332aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0R5_PSEUX
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA27864.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids1_trim150_scaffold_1081_curated_15
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16229..16540
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000372DFB6
molybdopterin converting factor, small subunit
Molybdopterin converting factor, small subunit {ECO:0000313|EMBL:AFM19130.1}; Flags: Precursor;; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
scnpilot_solids1_trim150_scaffold_1081_curated_16
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16914..17681
DNA (768bp) protein (256aa)
membrane protein n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029AD144
Putative integral membrane protein {ECO:0000313|EMBL:KJF25226.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
C2 domain containing protein
scnpilot_solids1_trim150_scaffold_1081_curated_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17880..18956
DNA (1077bp) protein (359aa)
aminotransferase class V n=1 Tax=Brevibacterium linens RepID=UPI0000510357
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACV81072.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1081_curated_18
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19017..19262)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B68762
Uncharacterized protein {ECO:0000313|EMBL:KHL01625.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1081_curated_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19284..20555)
DNA (1272bp) protein (424aa)
ABC transporter permease n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F15F6
Uncharacterized protein {ECO:0000313|EMBL:AIJ23606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ABC transporter permease
scnpilot_solids1_trim150_scaffold_1081_curated_20
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20552..21463)
DNA (912bp) protein (304aa)
ABC transporter ATP-binding protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036D68D8
ABC transporter related protein {ECO:0000313|EMBL:EFC86112.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC-type transporter
scnpilot_solids1_trim150_scaffold_1081_curated_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21548..22039)
DNA (492bp) protein (164aa)
VanZ family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X808_NAKMY
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:ACV81011.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1081_curated_22
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22088..22438
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZD8_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44859.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids1_trim150_scaffold_1081_curated_23
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22435..22905
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3108A
LigA protein {ECO:0000313|EMBL:EWM63485.1}; Flags: Fragment;; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1081_curated_24
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22781..23644)
DNA (864bp) protein (288aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EWT07313.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EWT07313.1};; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Streptomyces albus J1074 RepID=D6B1P3_9ACTO
3-hydroxybutyryl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_1081_curated_25
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23641..24378)
DNA (738bp) protein (246aa)
short-chain dehydrogenase n=1 Tax=Yaniella halotolerans RepID=UPI0003B51A3A
Uncharacterized protein {ECO:0000313|EMBL:AIY03172.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_1081_curated_26
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24391..26034)
DNA (1644bp) protein (548aa)
hydrolase n=1 Tax=Yaniella halotolerans RepID=UPI0003B59E37
Uncharacterized protein {ECO:0000313|EMBL:AIY03177.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
amidohydrolase; K07047
scnpilot_solids1_trim150_scaffold_1081_curated_27
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26176..27564
DNA (1389bp) protein (463aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
glycine dehydrogenase (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2]
glycine dehydrogenase subunit 1 n=1 Tax=Yaniella halotolerans RepID=UPI0003B6E114
scnpilot_solids1_trim150_scaffold_1081_curated_28
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27561..29264
DNA (1704bp) protein (568aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
glycine dehydrogenase subunit 2 n=1 Tax=Yaniella halotolerans RepID=UPI0003B30908
scnpilot_solids1_trim150_scaffold_1081_curated_29
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29483..30379
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000379DEC3
Uncharacterized protein {ECO:0000313|EMBL:AIY03173.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
ATP-NAD/AcoX kinase
scnpilot_solids1_trim150_scaffold_1081_curated_30
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30385..31158)
DNA (774bp) protein (258aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
nitrilase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B31CAA
Uncharacterized protein {ECO:0000313|EMBL:KFG70636.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Displaying items 1-30 of 69 in total

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