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scnpilot_solids1_trim150_scaffold_1782_curated_22

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(18106..18456)

Top 3 Functional Annotations

Value Algorithm Source
PemK family protein; K07171 mRNA interferase [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 112.0
  • Bit_score: 161
  • Evalue 1.60e-37
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 112.0
  • Bit_score: 161
  • Evalue 7.10e-37
mRNA interferase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SG18_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 112.0
  • Bit_score: 161
  • Evalue 5.00e-37

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Taxonomy

Intrasporangium calvum → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGCTGACGCCGGGTGACATCGTCGAATTGGATCTCGGCCCGCCGACCGGTTCGGAGGCGGGCATGCTCCGCCCGGCAGTCGTGGTGACTGCCGGCCGCGTCCTCCGTGGCGATCCGAACGTCATCCAGGTGGTGCCGCTTACCCGCACCCTGCGCGATAGCGGCGCGGAAGTCGTCATCGAACCGGACCGCGCCAACGGGCTCGCGGCGCCATCGGCAGCGCAATGCCAGCACGTCCGGTCGGTGGCAACGAGCCGCTGCCGATCGCGCGTCGGGACAATCGGACCGGTCGCGCTCGCGCAGATCCGCGGAACGCTCGCCTTGCTACTCGATATTCACCGACAAGTATGA
PROTEIN sequence
Length: 117
MLTPGDIVELDLGPPTGSEAGMLRPAVVVTAGRVLRGDPNVIQVVPLTRTLRDSGAEVVIEPDRANGLAAPSAAQCQHVRSVATSRCRSRVGTIGPVALAQIRGTLALLLDIHRQV*