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scnpilot_solids1_trim150_scaffold_1782_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1782_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..329)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJF2_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78617.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1782_curated_2
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(385..852)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F560_MODMB
Polyketide cyclase {ECO:0000313|EMBL:KGH46766.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1782_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(996..2210)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJE2_NAKMY
hypothetical protein; K09927 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78607.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1782_curated_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2328..2741)
DNA (414bp) protein (138aa)
Putative thiol-disulfide oxidoreductase DCC n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y582_THEBD
putative thiol-disulfide oxidoreductase DCC
Putative thiol-disulfide oxidoreductase DCC {ECO:0000313|EMBL:ADG89277.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
scnpilot_solids1_trim150_scaffold_1782_curated_5
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2799..3926)
DNA (1128bp) protein (376aa)
hypothetical protein n=2 Tax=Rhodococcus RepID=UPI0003765B12
Uncharacterized protein {ECO:0000313|EMBL:CDZ90873.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1782_curated_6
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4089..4868)
DNA (780bp) protein (260aa)
bdh; D-beta-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000361642F
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_1782_curated_7
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4849..5829)
DNA (981bp) protein (327aa)
Alpha/beta hydrolase fold protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V6V4_9MICC
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMY33988.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
alpha/beta hydrolase fold protein
scnpilot_solids1_trim150_scaffold_1782_curated_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5826..6866)
DNA (1041bp) protein (347aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
Beta-ketoacyl-acyl-carrier-protein synthase I {ECO:0000313|EMBL:ADG87150.1}; EC=2.3.1.41 {ECO:0000313|EMBL:ADG87150.1};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y496_THEBD
scnpilot_solids1_trim150_scaffold_1782_curated_9
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6863..7591)
DNA (729bp) protein (243aa)
TetR family transcriptional regulator n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V1N4_9MICC
TetR family transcriptional regulator {ECO:0000313|EMBL:EMY33987.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1782_curated_10
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7588..9135)
DNA (1548bp) protein (516aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036804B4
Acid--CoA ligase {ECO:0000313|EMBL:KEP22952.1}; Flags: Fragment;; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
scnpilot_solids1_trim150_scaffold_1782_curated_11
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9132..10292)
DNA (1161bp) protein (387aa)
ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289C659
Uncharacterized protein {ECO:0000313|EMBL:ERI41340.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids1_trim150_scaffold_1782_curated_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10289..11179)
DNA (891bp) protein (297aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHB4_9ACTN
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EPR75994.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids1_trim150_scaffold_1782_curated_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11176..11898)
DNA (723bp) protein (241aa)
branched-chain amino acid transport system ATP-binding protein (EC:3.6.3.22); K01996 branched-chain amino acid transport system ATP-binding protein
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:AEV83644.1}; EC=3.6.3.22 {ECO:0000313|EMBL:AEV83644.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S557_ACTS5
scnpilot_solids1_trim150_scaffold_1782_curated_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11895..12653)
DNA (759bp) protein (253aa)
ABC transporter related n=2 Tax=Micromonospora RepID=D9SYC6_MICAI
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ADL49107.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
scnpilot_solids1_trim150_scaffold_1782_curated_15
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12693..14030)
DNA (1338bp) protein (446aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBS6_INTC7
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDQ70969.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_1782_curated_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14252..15004
DNA (753bp) protein (251aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7Z4_NAKMY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACV80997.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1782_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15083..16549)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000306FF01
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CDK02007.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the major facilitator superfamily
scnpilot_solids1_trim150_scaffold_1782_curated_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16712..17020)
DNA (309bp) protein (103aa)
UPI0003D632A1 related cluster n=1 Tax=unknown RepID=UPI0003D632A1
Virulence associated protein {ECO:0000313|EMBL:ETI83548.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid maintenance system antidote protein
scnpilot_solids1_trim150_scaffold_1782_curated_19
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17031..17309)
DNA (279bp) protein (93aa)
Toxin higB-1 n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NF01_9MICC
Toxin higB-1 {ECO:0000313|EMBL:EMR00390.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
plasmid maintenance system killer; K07334 proteic killer suppression protein
scnpilot_solids1_trim150_scaffold_1782_curated_20
unknown

Not on your lists

17468..17812
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1782_curated_21
unknown

Not on your lists

17805..18011
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1782_curated_22
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18106..18456)
DNA (351bp) protein (117aa)
PemK family protein; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
mRNA interferase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SG18_INTC7
scnpilot_solids1_trim150_scaffold_1782_curated_23
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18953..19717
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036C6DE6
Uncharacterized protein {ECO:0000313|EMBL:EFC84812.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1782_curated_24
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19856..20092)
DNA (237bp) protein (79aa)
CopG family transcripitonal regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B7938E
CopG family transcriptional regulator
Helix-turn-helix protein, CopG family {ECO:0000313|EMBL:ABA56937.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
scnpilot_solids1_trim150_scaffold_1782_curated_25
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(20089..20208)
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037A0EC7
hypothetical protein; K09803 hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
scnpilot_solids1_trim150_scaffold_1782_curated_26
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20529..22124
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KF06_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM72750.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
beta-lactamase/transpeptidase-like protein
scnpilot_solids1_trim150_scaffold_1782_curated_27
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22284..22865
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037690A2
Uncharacterized protein {ECO:0000313|EMBL:KHL00111.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
Displaying 27 items

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