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scnpilot_solids1_trim150_scaffold_2946_curated_10

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(8972..9361)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X804_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 128.0
  • Bit_score: 203
  • Evalue 1.30e-49
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 128.0
  • Bit_score: 203
  • Evalue 4.00e-50
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACV81007.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 128.0
  • Bit_score: 203
  • Evalue 1.80e-49

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGCCCAGCGGCAAGGTGAAATGGTTCGACGCCGAAAAGGGATTCGGGTTCATCGCGCCGCAGGGCGGCGGTGACGATGTCCACGTGCGCATCTCGGCGCTGCCCGCCGGCGTCACCACGCTGAAACCGGGCCAGAAGGTCGAGTTCGGGGTGGCGGACGGCCGCCGCGGGCCGCAGGCACTGCAGGTGCAGCTGGTGGACGCCCCGCAGAGCATCACGCCGCAGCACCGCCGCTCCGCCGACGAGCTGCACGGCCTGATCGAGGACCTCATCAAGCTGCTGGAGACCAAGGCCATGCCGGGGCTGCGGCACGGCCGCTACCCCGACCGGGCCACGTCCGGACGCATCGCCGATGTGATGCGCGCGGTCGCCGCGGAGTTCGACCAGTAG
PROTEIN sequence
Length: 130
VPSGKVKWFDAEKGFGFIAPQGGGDDVHVRISALPAGVTTLKPGQKVEFGVADGRRGPQALQVQLVDAPQSITPQHRRSADELHGLIEDLIKLLETKAMPGLRHGRYPDRATSGRIADVMRAVAAEFDQ*