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scnpilot_solids1_trim150_scaffold_2946_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2946_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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1..492
DNA (492bp) protein (164aa)
ABC transporter related n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7Y6_NAKMY
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV80989.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(562..1518)
DNA (957bp) protein (319aa)
tRNA/rRNA methyltransferase SpoU; K00599 [EC:2.1.1.-]
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7Z1_NAKMY
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACV80994.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_3
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1619..3292)
DNA (1674bp) protein (558aa)
Permease, MFS-type n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JRA7_SACES
Permease, MFS-type
Permease, MFS-type {ECO:0000313|EMBL:CCH27867.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_solids1_trim150_scaffold_2946_curated_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(3289..3570)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI0003701B49
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV81001.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3939..4142
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7Z9_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81002.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4242..5114)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X801_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:EWC58748.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2946_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5212..7263
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X802_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81005.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_8
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7365..7865
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HIJ0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD63380.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2946_curated_9
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7868..8872
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003768740
Uncharacterized protein {ECO:0000313|EMBL:KFF58410.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
NADH-dependent dihydrogenase
scnpilot_solids1_trim150_scaffold_2946_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8972..9361)
DNA (390bp) protein (130aa)
Cold-shock DNA-binding domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X804_NAKMY
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACV81007.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9540..10160)
DNA (621bp) protein (207aa)
haloacid dehalogenase domain-containing protein hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X807_NAKMY
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ACV81010.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2946_curated_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10291..11517)
DNA (1227bp) protein (409aa)
Molybdenum import ATP-binding protein ModC {ECO:0000313|EMBL:AHH93938.1}; EC=3.6.3.29 {ECO:0000313|EMBL:AHH93938.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
ABC transporter ATP-binding protein (EC:3.6.3.29); K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035F4A10
scnpilot_solids1_trim150_scaffold_2946_curated_13
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11514..12296)
DNA (783bp) protein (261aa)
molybdate ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B2ECD7
Molybdenum transport system permease protein ModB {ECO:0000313|EMBL:EPR76669.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
molybdate ABC transporter, inner membrane subunit; K02018 molybdate transport system permease protein
scnpilot_solids1_trim150_scaffold_2946_curated_14
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12383..12871)
DNA (489bp) protein (163aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BYF0_XYLCX
molybdenum ABC transporter substrate-binding protein; K02020 molybdate transport system substrate-binding protein
Molybdenum ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:CDO07077.1}; Flags: Precursor;; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
Displaying 14 items

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