ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_439_curated_5

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 5414..6877

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7X5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 487.0
  • Bit_score: 505
  • Evalue 4.50e-140
Chemotaxis protein {ECO:0000313|EMBL:KGJ75408.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 486.0
  • Bit_score: 535
  • Evalue 5.70e-149
Methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 492.0
  • Bit_score: 398
  • Evalue 2.50e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryobacterium roopkundense → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGTCCGCGACCGCCCGCGCGCAACGCCTGCGCCACGTGATCGAGAGTGACGCCGCCTTGCGCCTGCTGCGCGCCGGAGACAGCGCGGCGCACGGCGCTGCCGTCATGGGCCTGCTCGCCGAGCACCTCGGCGGAGACGAGCGGCGCCTTGCCGCCGACGCACTCTACGAGCGGCTGGACGCCGACCTTGACCAGCTGCGCGCCGCCGGTTTCGAGTTGAAGGGCAGCACAAAGGGCTATGTCGCGCAGTGGCGCAACGCCGGGTTCCTGATCCGGCGCGCCAGTGACAATTCCCGCAGTGAAACCTACGAGCTCACCAGTCACGCGCTGCTCGCGGTGCGCTTTCTCGATGAGGTTGGCGAGCCGCGCCAGACGGCCACCGAGTCCCGCCTCGCAAGCCTCGCCGCGCAGCTCCGTCAGCTCGCCATCGACACCGACCCGCAGTCGCAGCGGCGCCTGCAGCGGCTGGAGCTGGAGCGGGCGCGGATCGACGCGGCGATCGAGGCGATCCGCTCCGGCGATGACGAACCGCTGGGCGGCACCCGGGCCGTCGAACGCATCCGCGACCTCATCGATCAGGCCGCGGCGGTCCCGGATGATTTCGCCCGGGTCCGCGCCGAGTTCGAGTCGCTCGGGGCACTGCTGCGTGAGCAGATCATCGAATCCGACGCGACCCAGCGCACAATGTTAGACGACGTCTTCCGTGGCGTCGACCTCATCGCCGAAAGCGATGCCGGCCGCACGTTTCGCGCCTTCACGGACCTTGTGCTCGACCCGGCCGTGGGCAGCGCCTTCGAGGACGACGTCGACCAGGTACTGGACCGCGACTTTGCCCGCGCGCTCGGCCCGGTGCAGCGGCACCTACTGCGCCAGTTCATCGCCACGCTCAAGGAGCGCACCGCCGAGATCCAGGACGTTGCCACGGTGTTTGCCCGCGGGCTGCGCCGCTATGTGCAGTCGCAGGATTACCGCCGCGACCGCGTGCTGAGGCAGCTGATTCGCAGCGCCCTGCAGAGCGGCATCGCCGCAAGCGAGATGGCCAAGCCGTATCAGCGCATCGGGGTCGACCTCGCACTCACCGGCGTGGCGATGTCCAGCATCGCGGCGCTGCGCCTGCACGACCCAGCCGAGTACGACGCCGGCGAACCGGTCACCGTCAACGAGACCGGCGTCGCGGACCTCGCCGCGCTGCGCGAACTGGCCCGGCTCACCGAAATCGACTTCGATGAGCTCACCACCAACGTCAACGCCGTCCTTTCCGGCCGGCCGTCGGCCACGGTCGGCGAGGTCCTCGCCGCATTCCCGGCAACGCAGGGCGTCGCCAGCGTCGTTGGCCTGCTGTCGCTGGCCGCGGTGTACGGCGCGGTCGAGGACGCTGTGGAACACCTCGCCTGGACGGGAGTCGATGGCGCCGCGCGTGCCGCCGACGTGGTGCAGCATCGCTTCCTGGGAAGGGTTGCGTGA
PROTEIN sequence
Length: 488
MSATARAQRLRHVIESDAALRLLRAGDSAAHGAAVMGLLAEHLGGDERRLAADALYERLDADLDQLRAAGFELKGSTKGYVAQWRNAGFLIRRASDNSRSETYELTSHALLAVRFLDEVGEPRQTATESRLASLAAQLRQLAIDTDPQSQRRLQRLELERARIDAAIEAIRSGDDEPLGGTRAVERIRDLIDQAAAVPDDFARVRAEFESLGALLREQIIESDATQRTMLDDVFRGVDLIAESDAGRTFRAFTDLVLDPAVGSAFEDDVDQVLDRDFARALGPVQRHLLRQFIATLKERTAEIQDVATVFARGLRRYVQSQDYRRDRVLRQLIRSALQSGIAASEMAKPYQRIGVDLALTGVAMSSIAALRLHDPAEYDAGEPVTVNETGVADLAALRELARLTEIDFDELTTNVNAVLSGRPSATVGEVLAAFPATQGVASVVGLLSLAAVYGAVEDAVEHLAWTGVDGAARAADVVQHRFLGRVA*