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scnpilot_solids1_trim150_scaffold_439_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_439_curated_1
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(401..2815)
DNA (2415bp) protein (805aa)
putative helicase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00036C7813
Helicase {ECO:0000313|EMBL:EMY33850.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
scnpilot_solids1_trim150_scaffold_439_curated_2
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3388..3789)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288E94C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ03187.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
scnpilot_solids1_trim150_scaffold_439_curated_3

Not on your lists

comp(4360..4698)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_324 RepID=L7VVL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC71068.1}; TaxID=1256572 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_4
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4695..5165)
DNA (471bp) protein (157aa)
Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1F9_ACIFD
XRE family transcriptional regulator; K07075
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU53008.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
scnpilot_solids1_trim150_scaffold_439_curated_5
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5414..6877
DNA (1464bp) protein (488aa)
Methyl-accepting chemotaxis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7X5_9MICO
Chemotaxis protein {ECO:0000313|EMBL:KGJ75408.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
Methyl-accepting chemotaxis protein
scnpilot_solids1_trim150_scaffold_439_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6973..7659
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7X6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06976.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7656..10979
DNA (3324bp) protein (1108aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4312A
Uncharacterized protein {ECO:0000313|EMBL:EXJ51615.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_8
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10966..12171
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6A88C
Uncharacterized protein {ECO:0000313|EMBL:EPR75027.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_9
Rhodococcus fascians, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12308..12745)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodococcus fascians D188 RepID=G8JYR0_RHOFA
Uncharacterized protein {ECO:0000313|EMBL:AET25181.1}; TaxID=1051973 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus fascians D188.;"
scnpilot_solids1_trim150_scaffold_439_curated_10
unknown

Not on your lists

comp(12880..13386)
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_439_curated_11
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13655..15340)
DNA (1686bp) protein (562aa)
Alpha-glucosidase n=3 Tax=Amycolatopsis mediterranei RepID=D8I439_AMYMU
Alpha-glucosidase {ECO:0000313|EMBL:KDN19078.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
malZ; alpha-glucosidase
scnpilot_solids1_trim150_scaffold_439_curated_12
unknown

Not on your lists

comp(15356..15469)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_439_curated_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15466..17133)
DNA (1668bp) protein (556aa)
Uncharacterized protein id=7720336 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPD72938.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17130..18002)
DNA (873bp) protein (291aa)
ABC transporter, permease protein id=7720337 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPD72937.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
scnpilot_solids1_trim150_scaffold_439_curated_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17999..18961)
DNA (963bp) protein (321aa)
ABC transporter, permease protein n=2 Tax=Actinomyces odontolyticus RepID=A7BBT7_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:EFF79483.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
scnpilot_solids1_trim150_scaffold_439_curated_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19051..20466)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZEY7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72935.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_439_curated_17
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20578..21822)
DNA (1245bp) protein (415aa)
ROK family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FH35_9ACTO
ROK family protein {ECO:0000313|EMBL:ELP70499.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_439_curated_18
unknown

Not on your lists

22469..22606
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_439_curated_19
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22848..23282)
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=2 Tax=Corynebacterineae RepID=L8DNT8_9NOCA
MerR family transcriptional regulator {ECO:0000313|EMBL:CCQ18310.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_439_curated_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23347..24777
DNA (1431bp) protein (477aa)
mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCJ0_NOCSJ
Mercuric reductase {ECO:0000313|EMBL:ABL79525.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_439_curated_21
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24840..25523
DNA (684bp) protein (228aa)
Alkylmercury lyase; K00221 alkylmercury lyase [EC:4.99.1.2]
Alkylmercury lyase n=3 Tax=Mycobacterium RepID=A4TAS3_MYCGI
Alkylmercury lyase {ECO:0000313|EMBL:KDA06942.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_439_curated_22
unknown

Not on your lists

25555..26034
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_439_curated_23
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26091..28349)
DNA (2259bp) protein (753aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B3D22D
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein {ECO:0000313|EMBL:CCQ46005.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
scnpilot_solids1_trim150_scaffold_439_curated_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28430..28777
DNA (348bp) protein (116aa)
PadR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B77C2B
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82474.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PadR-like family transcriptional regulator
scnpilot_solids1_trim150_scaffold_439_curated_25
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28759..29478
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B43C7C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI07563.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
scnpilot_solids1_trim150_scaffold_439_curated_26
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29784..30917
DNA (1134bp) protein (378aa)
Class V aminotransferase n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1EA24_9MICO
Class V aminotransferase {ECO:0000313|EMBL:EKA62242.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
cysteine desulfurase
scnpilot_solids1_trim150_scaffold_439_curated_27
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31013..31471)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000372F585
Vitamin K epoxide reductase {ECO:0000313|EMBL:EWS99855.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
vitamin K epoxide reductase
scnpilot_solids1_trim150_scaffold_439_curated_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31502..33496)
DNA (1995bp) protein (665aa)
Zinc-transporting ATPase {ECO:0000313|EMBL:KJL37349.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL37349.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Heavy metal translocating P-type ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB62_9MICO
ATPase P
scnpilot_solids1_trim150_scaffold_439_curated_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33496..33855)
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator n=1 Tax=Brevibacterium linens RepID=UPI0001BC2C47
HTH-type transcriptional regulator CmtR {ECO:0000313|EMBL:KJL39032.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ctpR; ArsR DNA-binding transcription regulator
scnpilot_solids1_trim150_scaffold_439_curated_30
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34107..34733)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FZ58_9BRAD
SAM-dependent methyltransferase protein {ECO:0000313|EMBL:AJC79702.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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