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scnpilot_solids1_trim150_scaffold_2451_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2451_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..470)
DNA (468bp) protein (156aa)
Rhomboid family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC4_BREDI
Rhomboid family protein {ECO:0000313|EMBL:EGF96203.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
rhomboid family protein
scnpilot_solids1_trim150_scaffold_2451_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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590..1030
DNA (441bp) protein (147aa)
Holdfast attachment protein A n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC5_BREDI
Holdfast attachment protein A {ECO:0000313|EMBL:EGF96204.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
holdfast attachment protein HfaA; K13585 holdfast attachment protein HfaA
scnpilot_solids1_trim150_scaffold_2451_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1027..2046
DNA (1020bp) protein (340aa)
Putative transcription activator protein hfaB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC6_BREDI
Putative transcription activator protein hfaB {ECO:0000313|EMBL:EGF96205.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Curli production assembly/transport component CsgG; K06214 curli production assembly/transport component CsgG
scnpilot_solids1_trim150_scaffold_2451_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2030..3226
DNA (1197bp) protein (399aa)
Holdfast attachment protein D n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC7_BREDI
Holdfast attachment protein D {ECO:0000313|EMBL:EGF96206.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2451_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3365..6244
DNA (2880bp) protein (960aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-]
Peptidase M16 inactive domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC8_BREDI
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EGF96207.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
scnpilot_solids1_trim150_scaffold_2451_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6371..7300)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUC9_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96208.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2451_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7469..7999)
DNA (531bp) protein (177aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPE2_BREDI
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EKY29848.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_2451_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8311..8370
DNA (60bp) protein (20aa)
Aspartyl/Asparaginyl beta-hydroxylase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWB7_BREDI
Aspartyl/Asparaginyl beta-hydroxylase family protein {ECO:0000313|EMBL:EGF95321.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
beta-hydroxylase, aspartyl/asparaginyl family
Displaying 8 items

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