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scnpilot_solids1_trim150_scaffold_14393_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_14393_curated_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..200
DNA (198bp) protein (66aa)
DNA topoisomerase III (Fragment) n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4XAN5_PSEAI
helicase domain-containing protein
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGE68023.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
scnpilot_solids1_trim150_scaffold_14393_curated_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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428..1027
DNA (600bp) protein (200aa)
Genomic scaffold, R77_Final2 n=4 Tax=Proteobacteria RepID=K4TDB4_BORBO
PilL protein {ECO:0000313|EMBL:CDM23743.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K02487 type IV pili sensor histidine kinase and response regulator
scnpilot_solids1_trim150_scaffold_14393_curated_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1024..1665
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KIP5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23742.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_14393_curated_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1680..2405
DNA (726bp) protein (242aa)
Integrating conjugative element protein n=3 Tax=Pseudomonas aeruginosa RepID=U5AQ88_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23741.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_14393_curated_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2387..2977
DNA (591bp) protein (197aa)
Lytic transglycosylase catalytic n=4 Tax=Proteobacteria RepID=B9MG58_ACIET
lytic transglycosylase subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACM32649.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_14393_curated_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2974..3513
DNA (540bp) protein (180aa)
Integrating conjugative element protein n=4 Tax=Proteobacteria RepID=T5KU54_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23739.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_14393_curated_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3518..4579
DNA (1062bp) protein (354aa)
Conjugal transfer protein TraG n=3 Tax=Pseudomonas aeruginosa RepID=V4V8K4_PSEAI
Conjugative coupling factor TraD, PFGI-1 class {ECO:0000313|EMBL:ETU97006.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
VirD4, type IV secretory pathway, VirD4 components
Displaying 7 items

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