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scnpilot_solids1_trim150_scaffold_1816_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1816_curated_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..262)
DNA (261bp) protein (87aa)
formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16]
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Acidovorax sp. CF316 RepID=J0U7Y5_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJE52177.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_solids1_trim150_scaffold_1816_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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428..655
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B55A7
Uncharacterized protein {ECO:0000313|EMBL:GAD20898.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1816_curated_3
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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934..2286
DNA (1353bp) protein (451aa)
integrase n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003658395
Integrase {ECO:0000313|EMBL:KEZ03616.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_1816_curated_4
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2364..2726
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003789745
Uncharacterized protein {ECO:0000313|EMBL:KEZ03615.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1816_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2726..3046
DNA (321bp) protein (107aa)
XRE family transcriptional regulator 1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNW1_9GAMM
XRE family transcriptional regulator 1 {ECO:0000313|EMBL:EIM01153.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
XRE family transcriptional regulator 1
scnpilot_solids1_trim150_scaffold_1816_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3069..3788
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000371016B
Uncharacterized protein {ECO:0000313|EMBL:GAO24348.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1816_curated_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3785..4507)
DNA (723bp) protein (241aa)
Putative NADPH-dependent FMN reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z4D6_9RHOO
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EIZ02960.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
arsenical resistance protein ArsH; K11811 arsenical resistance protein ArsH
scnpilot_solids1_trim150_scaffold_1816_curated_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4500..4922)
DNA (423bp) protein (141aa)
arsC1; arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:CAP41354.1}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:CAP41354.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Arsenate reductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9C9_BORPD
scnpilot_solids1_trim150_scaffold_1816_curated_9
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4937..6022)
DNA (1086bp) protein (362aa)
Putative sodium bile acid symporter family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9D2_BORPD
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family
Putative sodium bile acid symporter family protein {ECO:0000313|EMBL:CAP41355.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_1816_curated_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6033..6527)
DNA (495bp) protein (165aa)
arsCa; arsenate reductase (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000313|EMBL:CCH05069.1}; EC=1.20.4.1 {ECO:0000313|EMBL:CCH05069.1};; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
Arsenate reductase n=3 Tax=Proteobacteria RepID=A4G6H5_HERAR
scnpilot_solids1_trim150_scaffold_1816_curated_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6532..6855)
DNA (324bp) protein (108aa)
ArsR family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZAU5_9RHOO
arsR(3); ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENO89299.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
scnpilot_solids1_trim150_scaffold_1816_curated_12
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7047..9689)
DNA (2643bp) protein (881aa)
hypothetical protein id=12552226 bin=BDI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ATPase {ECO:0000313|EMBL:KGR61075.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1816_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10055..10561
DNA (507bp) protein (169aa)
DNA repair protein RadC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNX2_9GAMM
DNA repair protein RadC {ECO:0000313|EMBL:EIM01164.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
radC; DNA repair protein; K03630 DNA repair protein RadC
Displaying 13 items

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