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scnpilot_solids1_trim150_scaffold_1230_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1230_curated_1

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3..161
DNA (159bp) protein (53aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase (Glutamine-hydrolyzing) (Glutamine amidotransferase) (GMP synthetase) (GMPS) {ECO:0000313|EMBL:CBH97704.1}; EC=6.3.5.2 {ECO:0000313|EMBL:CBH97704.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GMP synthase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000349EBBB
scnpilot_solids1_trim150_scaffold_1230_curated_2
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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470..1678
DNA (1209bp) protein (403aa)
Integrase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PTY7_9BURK
Integrase {ECO:0000313|EMBL:AHB06160.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
phage integrase family protein
scnpilot_solids1_trim150_scaffold_1230_curated_3
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1653..1895)
DNA (243bp) protein (81aa)
Putative regulatory protein, AlpA family n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BSP9_XANC5
AlpA family regulatory protein; K07733 prophage regulatory protein
Putative regulatory protein, AlpA family {ECO:0000313|EMBL:CAJ24160.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_solids1_trim150_scaffold_1230_curated_4
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1983..2816)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudomonas savastanoi pv. savastanoi NCPPB 3335 RepID=D7I752_PSESS
Uncharacterized protein {ECO:0000313|EMBL:KGS11730.1}; TaxID=53409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas coronafaciens.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1230_curated_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2951..3163
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Pseudomonas monteilii RepID=UPI0002F30148
Plasmid-related protein {ECO:0000313|EMBL:BAP88950.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1230_curated_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3171..4064
DNA (894bp) protein (298aa)
Plasmid encoded RepA protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ61_ACIAC
plasmid encoded RepA protein
Plasmid encoded RepA protein {ECO:0000313|EMBL:ABM30999.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_7
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4822..5016)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ62_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31000.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5096..5317)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. multiplex Griffin-1 RepID=U2AJE1_XYLFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM58589.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_solids1_trim150_scaffold_1230_curated_9
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5314..5547)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ63_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31001.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_10
unknown

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comp(5569..5763)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1230_curated_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5785..7704)
DNA (1920bp) protein (640aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ64_ACIAC
TrbL/VirB6 plasmid conjugal transfer protein; K07344 type IV secretion system protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM31002.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_12
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7701..8120)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ65_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31003.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8566..8955
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ66_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31004.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_1230_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9122..9598
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5L4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84190.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_1230_curated_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9595..12558
DNA (2964bp) protein (988aa)
N-6 DNA methylase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8I0M4_PSEAI
N-6 DNA methylase {ECO:0000313|EMBL:GAO23799.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
N-6 DNA methylase
scnpilot_solids1_trim150_scaffold_1230_curated_16
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12708..13220
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8XMX1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE16238.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
scnpilot_solids1_trim150_scaffold_1230_curated_17
unknown

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comp(13244..13591)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1230_curated_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14086..14709
DNA (624bp) protein (208aa)
FAD-dependent oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000360E0AC
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAD24173.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
Displaying 18 items

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