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scnpilot_solids1_trim150_scaffold_2412_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2412_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(65..1759)
DNA (1695bp) protein (565aa)
Primase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5Q5_9BURK
primase 2
Primase 2 {ECO:0000313|EMBL:AFU46524.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_2412_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2125..2358)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6Q1_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:GAO21239.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2412_curated_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2465..2788
DNA (324bp) protein (108aa)
Transposase IS911 HTH and LZ region n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q81ZQ0_NITEU
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:CDM25187.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
transposase IS911
scnpilot_solids1_trim150_scaffold_2412_curated_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2785..3708
DNA (924bp) protein (308aa)
Integrase, catalytic region n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4H4_ACISJ
Transposase {ECO:0000313|EMBL:KEH09016.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_2412_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3845..4726)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVT0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99475.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_2412_curated_6
unknown

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comp(4832..5083)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2412_curated_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5186..5464)
DNA (279bp) protein (93aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW7_THIK1
XRE family transcriptional regulator
Tax=CG_Rhodof_04
scnpilot_solids1_trim150_scaffold_2412_curated_8
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5461..5784)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW8_THIK1
Phage-related protein {ECO:0000313|EMBL:BAO83139.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2412_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6471)
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO26165.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_2412_curated_10

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comp(6468..7823)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0U9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98935.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phage integrase family protein
scnpilot_solids1_trim150_scaffold_2412_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8106..8441)
DNA (336bp) protein (112aa)
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL8_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEB83787.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 11 items

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