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scnpilot_solids1_trim150_scaffold_4002_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4002_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
UPF0234 protein CtesDRAFT_PD3108 n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WZT9_COMTE
hypothetical protein; K09767 hypothetical protein
UPF0234 protein CTATCC11996_22407 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
scnpilot_solids1_trim150_scaffold_4002_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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222..1304
DNA (1083bp) protein (361aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
udp-n-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C5547
scnpilot_solids1_trim150_scaffold_4002_curated_3
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1447..2322)
DNA (876bp) protein (292aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KTZ3_9BURK
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EGI76745.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
DNA-binding transcriptional regulator
scnpilot_solids1_trim150_scaffold_4002_curated_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2397..3458
DNA (1062bp) protein (354aa)
Uncharacterized protein family UPF0324 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE35_ALIDK
Membrane protein {ECO:0000313|EMBL:AHY59319.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4002_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3585..4253
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTA3_ALIDB
hypothetical protein; K09125 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85756.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_4002_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4253..4960
DNA (708bp) protein (236aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
7-cyano-7-deazaguanine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTA4_ALIDB
exoenzyme S synthesis protein B; K06920 queuosine biosynthesis protein QueC
scnpilot_solids1_trim150_scaffold_4002_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5045..5623)
DNA (579bp) protein (193aa)
TonB-dependent copper receptor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXY4_ALIDB
tonb-dependent copper receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent copper receptor {ECO:0000313|EMBL:AEB86948.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 7 items

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