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scnpilot_solids1_trim150_scaffold_5372_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5372_curated_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..838
DNA (837bp) protein (279aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Ornithine carbamoyltransferase n=2 Tax=Acidovorax RepID=A1WA63_ACISJ
ornithine carbamoyltransferase
scnpilot_solids1_trim150_scaffold_5372_curated_2
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(842..1174)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVB6_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EXU81840.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5372_curated_3
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1185..1730)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G6L9_9BURK
DNA repair protein {ECO:0000313|EMBL:KDR35672.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5372_curated_4
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1727..1936)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HU33_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:KES20132.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5372_curated_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2021..3412)
DNA (1392bp) protein (464aa)
class II fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
fumarate hydratase n=1 Tax=Acidovorax avenae RepID=UPI00031381CB
scnpilot_solids1_trim150_scaffold_5372_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3567..4529
DNA (963bp) protein (321aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2]
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U298_ALIDB
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:AEB86082.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 6 items

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