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scnpilot_solids1_trim150_scaffold_5111_curated_1

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: 1..1869

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 707.0
  • Bit_score: 642
  • Evalue 1.60e-181
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 707.0
  • Bit_score: 642
  • Evalue 7.30e-181
Ribonuclease E n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAY7_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 707.0
  • Bit_score: 642
  • Evalue 5.20e-181

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGCGCCTGCGCGACCTGGGCGGCCTGATCGTGATCGACTTCATCGACATGGAGGAGAGCAAGAACCGCCGCGAGGTCGAGAACCGCCTGCGCGACGCGCTGCGCCAGGACCGCGCGCGCGTGCAGTTCGGCACCATCAGCAAATTCGGCCTCATGGAGATGAGCCGCCAGCGCCTGAAGCCCGCGCTCTCCGAGGGCGCGCACATCCGCTGCCCGCTGTGCGACGGCACCGGCCACGTGCGCGACACCGAGGGCTTTGCGCTGCAGATGCTGCGCATGATCCAGGAAGAATCCATGAAGGACAGCACCGCCGCCGTGCACTGCCAGGTGCCGGTGGAGGTGGCAAGCTTCCTGCTCAACGAAAAGCGCGCCGAGATCGCCAAGATCGAGCTGCGCCAGCGCATCTCGGTGGTGCTGATCCCCAACAAGTCGCTCGAAACACCGCACTACCACCTGGAGCGCCTCAAGCACGACGACCCGCGCCTGGACGACCTGGACGCCAGCTACAAGATGGCCGACGTGCAGGAAGAGCCGACGCAGATCACGCGCCGCTCGCAGGAGCCCACCAACAAGCAGACGCCGGTGATCAAGGGCGTGCTGCCCGATGCACCCGCGCCCATCGTCGCGCCCAAGCCTGCGCCGGTGCAGGCGGCACCGGCTCCGCGAGCCGCTCCGGTGACGCCTGCCCCCGCGCCGCAACAGGGCTTCTTCTCCTGGGTCAAATCCGTGCTGGGGCTGGGCGCGCCCGCGCCGGCGGCCAGCGCCGCGGCACCTGCTGCACCCGCGCCGGCCGAGACCGCCGCACGCGAAGAGCGCGGCGGTCAGCGCCGGGGCAACGGCTCCCGCCGTGGCGGGCAGCGTTCGGAGCGCTCCGAACCGCGCGAGGCCAATGGAGCCGAACGTCCGCGCCGCGAACCGCGTGAGCCACGTGAAGGGCGCGGCCACCGCGAGCGCGCCGAGCGCCAGAACACGCCTGCGCAAGACGGCAACGCCACGGCTGGCGCCACTGACGGTGGCACCGCACGCGAATCCGGCGCCGAGCGTGCTCCACGCGACCGCGAGCGCAGCCGCCGCCGCGAACCCCGTGAGCCGCGCGAACACCGTGAACGCGAGGGGGCGGACGCCGCCGCCACGCCGCCGCGCCCGCGCGAGCCGATGGCACCCCAGGCCGCGGCAGAATCCGCGGCCCTGGCACCGGCCGGGGACGGCACCGACGCCGCCACGTCCACCCATGGCGAGCAGCGCGAGCGCCGTTCGCGCGACCGTTACGGACGTGACCGCCATCGCCGCAACGAACGCCCGCAGGAACCCACCGAGGACCGCACCATCGAGCAGCCGGACCGCGAGCCGCATGCCGATTTCGAGCCCACCGTGGTCCTGGAAGAAAGCGAACTCCTGCCACCGCCCTCGCGCCGCAGCTACTTCGACACGCCCGCCCTCAATGCGCGCACGGCGCACGGCGCACAGGCCGAGCACGGCGGCGACGAAGGCCCCACGACGCTGATCGATGTCACGGTGCCCGCGGATCCGTCGCACAAGCCGCTGCAGACCGCATTGGCGGAAGATGTCGACACGACCGCGATGGCCGCGCCCGTGGCCGCCACCCCCGTGGCCCCGACGGCCGCCGAACCCTTCGCGCTGCCCGTGCAGACCCTGGCCGACATGGCACAGGCCTCGGGCCTCGTCTGGGTGCAGTCGGACACGGACAAGGTCGCGGCCGTGCAATCGGCCATCGCCGCCGAGCCTCACCCGGTGCACGTGCCGCGCGAGCGACCGGCGCCCGCCGAACCGGACGCAGGCCCGCTGGTGCTGGTGGAAACCCGCCGCGATCTGCGCCAGGTGCAGTTGCCGTTCGACCGGCAAGCCTGA
PROTEIN sequence
Length: 623
MRLRDLGGLIVIDFIDMEESKNRREVENRLRDALRQDRARVQFGTISKFGLMEMSRQRLKPALSEGAHIRCPLCDGTGHVRDTEGFALQMLRMIQEESMKDSTAAVHCQVPVEVASFLLNEKRAEIAKIELRQRISVVLIPNKSLETPHYHLERLKHDDPRLDDLDASYKMADVQEEPTQITRRSQEPTNKQTPVIKGVLPDAPAPIVAPKPAPVQAAPAPRAAPVTPAPAPQQGFFSWVKSVLGLGAPAPAASAAAPAAPAPAETAAREERGGQRRGNGSRRGGQRSERSEPREANGAERPRREPREPREGRGHRERAERQNTPAQDGNATAGATDGGTARESGAERAPRDRERSRRREPREPREHREREGADAAATPPRPREPMAPQAAAESAALAPAGDGTDAATSTHGEQRERRSRDRYGRDRHRRNERPQEPTEDRTIEQPDREPHADFEPTVVLEESELLPPPSRRSYFDTPALNARTAHGAQAEHGGDEGPTTLIDVTVPADPSHKPLQTALAEDVDTTAMAAPVAATPVAPTAAEPFALPVQTLADMAQASGLVWVQSDTDKVAAVQSAIAAEPHPVHVPRERPAPAEPDAGPLVLVETRRDLRQVQLPFDRQA*