ggKbase home page

scnpilot_solids1_trim150_scaffold_5111_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5111_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1869
DNA (1869bp) protein (623aa)
ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Ribonuclease E n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAY7_ACISJ
scnpilot_solids1_trim150_scaffold_5111_curated_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2028..2807
DNA (780bp) protein (260aa)
UPF0246 protein Dtpsy_2644 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDS0_ACIET
hypothetical protein; K09861 hypothetical protein
UPF0246 protein Dtpsy_2644 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_5111_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2804..3658
DNA (855bp) protein (285aa)
2OG-Fe(II) oxygenase; K00472 prolyl 4-hydroxylase [EC:1.14.11.2]
2OG-Fe(II) oxygenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ0_ACISJ
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ABM43415.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_5111_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3706..4551
DNA (846bp) protein (282aa)
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] id=12549865 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
queF; 7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 4 items

View Taxonomy