ggKbase | organisms

Consensus taxonomy: Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_15

Properties

Avg. coverage: 1.00 Longest contig: 69.43 Kbp Bin length: 1.40 Mbp GC content: 65.94 %

Contigs count: 575 Features count: 1744 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38

Displaying items 401-450 of 575 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_19306_curated Species: Acidovorax ebreus (50%)	2	1783 bp	69.43	1.00	100.11
scnpilot_solids1_trim150_scaffold_34918_curated Species: Acidovorax avenae (50%)	2	1118 bp	65.47	1.00	91.50
scnpilot_solids1_trim150_scaffold_37934_curated Species: Pusillimonas sp. T7-7 (100%)	2	1103 bp	63.92	1.00	86.22
scnpilot_solids1_trim150_scaffold_32277_curated Species: RLO_Burkholderiales_65_40 (50%)	2	1222 bp	70.70	1.00	100.16
scnpilot_solids1_trim150_scaffold_19427_curated Species: Alicycliphilus denitrificans (50%)	2	1788 bp	69.30	1.00	96.14
scnpilot_solids1_trim150_scaffold_41854_curated Species: RLO_Burkholderiales_65_40 (50%)	2	992 bp	64.21	1.00	49.60
scnpilot_solids1_trim150_scaffold_21857_curated Species: Rubrivivax benzoatilyticus (50%)	2	1642 bp	67.42	1.00	78.75
scnpilot_solids1_trim150_scaffold_50908_curated Species: Acidovorax sp. NO-1 (100%)	2	1391 bp	69.59	1.00	100.29
scnpilot_solids1_trim150_scaffold_36603_curated Species: Acidovorax delafieldii (50%)	2	1073 bp	68.31	1.00	89.19
scnpilot_solids1_trim150_scaffold_29447_curated Species: Burkholderia thailandensis (50%)	2	1311 bp	63.16	1.00	94.28
scnpilot_solids1_trim150_scaffold_28954_curated Species: Acidovorax sp. JS42 (50%)	2	1314 bp	69.48	1.00	99.54
scnpilot_solids1_trim150_scaffold_18467_curated Species: Acidovorax sp. MR-S7 (50%)	2	1757 bp	62.66	1.00	65.05
scnpilot_solids1_trim150_scaffold_40546_curated Species: Ramlibacter tataouinensis (50%)	2	1038 bp	68.98	1.00	94.22
scnpilot_solids1_trim150_scaffold_37769_curated Species: Acidovorax sp. KKS102 (50%)	2	1099 bp	75.25	1.00	96.63
scnpilot_solids1_trim150_scaffold_29291_curated Species: Alicycliphilus sp. B1 (100%)	2	1304 bp	71.55	1.00	93.17
scnpilot_solids1_trim150_scaffold_18503_curated Species: Comamonas testosteroni (50%)	2	1848 bp	64.88	1.00	96.92
scnpilot_solids1_trim150_scaffold_16151_curated Species: Acidovorax delafieldii (50%)	2	2015 bp	67.79	1.00	97.97
scnpilot_solids1_trim150_scaffold_28394_curated Species: Acidovorax sp. MR-S7 (50%)	2	1325 bp	63.62	1.00	86.72
scnpilot_solids1_trim150_scaffold_28930_curated Species: Burkholderia terrae (50%)	2	1348 bp	69.21	1.00	99.70
scnpilot_solids1_trim150_scaffold_24690_curated Species: Acidovorax delafieldii (50%)	2	1470 bp	58.50	1.00	64.69
scnpilot_solids1_trim150_scaffold_39825_curated Species: CG_Rhodof_04 (50%)	2	980 bp	68.67	1.00	99.80
scnpilot_solids1_trim150_scaffold_41182_curated Species: Burkholderia jiangsuensis (50%)	2	975 bp	55.90	1.00	56.31
scnpilot_solids1_trim150_scaffold_31689_curated Species: Alicycliphilus sp. B1 (100%)	2	1262 bp	69.10	1.00	100.32
scnpilot_solids1_trim150_scaffold_29738_curated Species: Pandoraea oxalativorans (50%)	2	1167 bp	65.12	1.00	91.52
scnpilot_solids1_trim150_scaffold_32796_curated Species: Acidovorax sp. MR-S7 (50%)	2	1129 bp	65.37	1.00	87.42
scnpilot_solids1_trim150_scaffold_36250_curated Species: Acidovorax sp. CF316 (50%)	2	1109 bp	67.81	1.00	89.27
scnpilot_solids1_trim150_scaffold_33915_curated Species: Burkholderia pseudomallei (100%)	2	1165 bp	61.80	1.00	95.54
scnpilot_solids1_trim150_scaffold_11823_curated Species: Acidovorax sp. JS42 (50%)	2	2543 bp	65.95	1.00	90.60
scnpilot_solids1_trim150_scaffold_40890_curated Species: Acidovorax sp. MR-S7 (50%)	2	1017 bp	70.70	1.00	93.81
scnpilot_solids1_trim150_scaffold_27555_curated Species: Acidovorax sp. MR-S7 (100%)	2	1330 bp	63.98	1.00	83.68
scnpilot_solids1_trim150_scaffold_41647_curated Species: Alicycliphilus denitrificans (50%)	2	1028 bp	68.58	1.00	100.10
scnpilot_solids1_trim150_scaffold_28273_curated Species: Massilia sp. LC238 (50%)	2	1311 bp	63.62	1.00	100.00
scnpilot_solids1_trim150_scaffold_27687_curated Species: Acidovorax sp. MR-S7 (50%)	2	1345 bp	68.48	1.00	100.15
scnpilot_solids1_trim150_scaffold_40443_curated Species: Acidovorax sp. CF316 (50%)	2	1030 bp	67.57	1.00	87.67
scnpilot_solids1_trim150_scaffold_25859_curated Species: Polaromonas sp. JS666 (50%)	2	1343 bp	68.28	1.00	98.06
scnpilot_solids1_trim150_scaffold_35216_curated Species: Acidovorax sp. MR-S7 (50%)	2	1157 bp	67.50	1.00	96.97
scnpilot_solids1_trim150_scaffold_26182_curated Species: Delftia tsuruhatensis (50%)	2	1451 bp	67.82	1.00	98.62
scnpilot_solids1_trim150_scaffold_14973_curated Species: Acidovorax temperans (50%)	2	2152 bp	67.24	1.00	95.63
scnpilot_solids1_trim150_scaffold_35271_curated Species: Alicycliphilus denitrificans (50%)	2	1074 bp	69.27	1.00	94.13
scnpilot_solids1_trim150_scaffold_29712_curated Species: Janthinobacterium lividum (50%)	2	1266 bp	62.95	1.00	96.92
scnpilot_solids1_trim150_scaffold_35376_curated Species: Alicycliphilus denitrificans (100%)	2	1139 bp	67.60	1.00	94.03
scnpilot_solids1_trim150_scaffold_32663_curated Species: Comamonas testosteroni (100%)	2	1195 bp	66.11	1.00	52.72
scnpilot_solids1_trim150_scaffold_22722_curated Species: Acidovorax sp. MR-S7 (50%)	2	1223 bp	75.39	1.00	89.29
scnpilot_solids1_trim150_scaffold_13682_curated Species: Ramlibacter tataouinensis (50%)	2	2238 bp	66.53	1.00	93.30
scnpilot_solids1_trim150_scaffold_8497_curated Species: Cupriavidus sp. HMR-1 (50%)	2	3225 bp	56.71	1.00	99.16
scnpilot_solids1_trim150_scaffold_19994_curated Species: Rubrivivax gelatinosus (100%)	2	1741 bp	67.55	1.00	97.19
scnpilot_solids1_trim150_scaffold_38177_curated Species: Acidovorax ebreus (50%)	2	1091 bp	68.65	1.00	98.17
scnpilot_solids1_trim150_scaffold_21467_curated Species: Alicycliphilus denitrificans (50%)	2	1634 bp	72.34	1.00	96.57
scnpilot_solids1_trim150_scaffold_41880_curated Species: Acidovorax sp. MR-S7 (50%)	2	999 bp	71.37	1.00	103.30
scnpilot_solids1_trim150_scaffold_26074_curated Species: Polaromonas sp. JS666 (50%)	2	1411 bp	67.04	1.00	97.59

Displaying items 401-450 of 575 in total

solids_Burkholderiales_3

SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Burkholderiales_3

SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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