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scnpilot_solids1_trim150_scaffold_2947_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2947_curated_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..208
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U5AS25_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23767.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2947_curated_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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420..1157
DNA (738bp) protein (246aa)
ABC transporter substrate-binding protein n=3 Tax=Pseudomonas aeruginosa RepID=U5ALZ1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23766.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
FIG00902157: hypothetical protein
scnpilot_solids1_trim150_scaffold_2947_curated_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1252..1530
DNA (279bp) protein (93aa)
Uridylate kinase n=4 Tax=Pseudomonas aeruginosa RepID=U5AN12_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23765.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2947_curated_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1565..2026)
DNA (462bp) protein (154aa)
Thioesterase superfamily {ECO:0000313|EMBL:CDM23764.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
thioesterase superfamily protein id=12551695 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
thioesterase superfamily protein
scnpilot_solids1_trim150_scaffold_2947_curated_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2056..2727)
DNA (672bp) protein (224aa)
UPI0003CF3A6D related cluster n=1 Tax=unknown RepID=UPI0003CF3A6D
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDM23763.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2947_curated_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2832..3185
DNA (354bp) protein (118aa)
Putative ACR protein {ECO:0000313|EMBL:CDM23762.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur id=12551698 bin=BDI species=Stenotrophomonas maltophilia genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur
scnpilot_solids1_trim150_scaffold_2947_curated_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..4315
DNA (1131bp) protein (377aa)
Cysteine desulfurase {ECO:0000313|EMBL:CDM23761.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CDM23761.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
iscS-2; cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] id=12551699 bin=BDI species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
iscS-2; cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7]
scnpilot_solids1_trim150_scaffold_2947_curated_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..5537
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDM23760.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
MFS permease id=12551700 bin=BDI species=Stenotrophomonas sp. SKA14 genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
MFS permease
scnpilot_solids1_trim150_scaffold_2947_curated_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5534..6064
DNA (531bp) protein (177aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=uncultured bacterium RepID=K2G2Z7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM23759.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
scnpilot_solids1_trim150_scaffold_2947_curated_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6090..6710
DNA (621bp) protein (207aa)
SAM-dependent methyltransferases {ECO:0000313|EMBL:CDM23758.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein id=12550228 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_2947_curated_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6983..7315
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIM2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23757.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
FIG076676: Hypothetical protein
Displaying 11 items

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