ggKbase home page

scnpilot_solids1_trim150_scaffold_10_curated_29

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 26261..27250

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI00035D906C similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 326.0
  • Bit_score: 503
  • Evalue 1.50e-139
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM25616.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 328.0
  • Bit_score: 600
  • Evalue 1.30e-168
TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 331.0
  • Bit_score: 230
  • Evalue 6.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAAATTCAAAACCCTGTTGCTGGCCGCGATGTGCGCGCTGGCCGTCACGACCGTTCAGGCGAAGACGTTGAAGTTGTCCCACCAGTGGCCCCAGGGAGACGGGCGGGACGCGGGGGCGCGGCTGTTCATCCAGGAGGTCCAGAAGCAGGACCCGTCCTTCAAGTTCCGCGTCTATCCGGGCGCGTCGCTGATCAGCAACCCGCTCAAGCAGATCGACGCGCTGGCCGACGGCTCCATCGACCTTTCGATTTTTCCCTTGATCTATGCCGTGGGGAAGGCGCCCGAATTTTCCATCACCATCCTGCCGGGGGCGATCAGCAGCGTGCAGGACGCCATGCGCTTCAAGGGCACGGACTATGAAAAGCGCCTGCAGGAAGTCGCGCGACGGCAGGGCTTTCATATCCTGACCTGGTGGTGGACGGAAGGCGGGATCGCCGACAAGGTGCGTCCCATCACCACGCCCGACAGCGTCAAGGGGCTGAAATTCCGGGGGGCGGACCGCACGATCGACACCATGCTGAAGGCCGCCGGGGCCTCGGTGTTCGCCATGCCCTCGACCGAACTCTACAACGCCATGCAGACCGGGGTGCTGGATGGCTTGATGACATCCTACGAAACCTTCATGAGCATGCGCCTGTACGAGCAGACCAAGTATGCGACCCTGGGCGGGGACTACACCATCTTCGTGGTGTTCCAGCCCCTGGTGATCTCGTCCAAGGCCTGGGACGGCCTCAGCGACGAGCAGAAGAAGATCTTCGAGAAGGCCGCCGAGGCCACCCTGCCGTCCTTCAACAAGGAACAGGACCGGATCAAGCATGAAGCCGTGAAGAAATTCCAGGCGGCGGGGGTCGAGGTGCGCGCCATGAGCAAGGAGGACTACGCCGCCTGGCTGGATCTGGCGCACAAGACGGCGTGGCCGGAGTATGCGGCCATCAGCCCGGAGGCCAAGGGCCTGCTGGAATCGGTCGAAGCCCTGGCCAAGAAATAG
PROTEIN sequence
Length: 330
MKFKTLLLAAMCALAVTTVQAKTLKLSHQWPQGDGRDAGARLFIQEVQKQDPSFKFRVYPGASLISNPLKQIDALADGSIDLSIFPLIYAVGKAPEFSITILPGAISSVQDAMRFKGTDYEKRLQEVARRQGFHILTWWWTEGGIADKVRPITTPDSVKGLKFRGADRTIDTMLKAAGASVFAMPSTELYNAMQTGVLDGLMTSYETFMSMRLYEQTKYATLGGDYTIFVVFQPLVISSKAWDGLSDEQKKIFEKAAEATLPSFNKEQDRIKHEAVKKFQAAGVEVRAMSKEDYAAWLDLAHKTAWPEYAAISPEAKGLLESVEALAKK*