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scnpilot_solids1_trim150_scaffold_411_curated_5

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 1736..2431

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Bordetella avium (strain 197N) RepID=RL1_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 231.0
  • Bit_score: 408
  • Evalue 6.10e-111
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 231.0
  • Bit_score: 423
  • Evalue 2.60e-115
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 231.0
  • Bit_score: 408
  • Evalue 1.90e-111

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCAAAGCTCAGCAAACGCGCCGCAGCCATCGCTGCCAAGATCGACCGCACCAAGCTGTACCCCGTGGCCGAAGCCCTGACCCTGGTCAAGGAAACCGCCACCGCCAAGTTCGATGAATCCATCGACGTGGCTGTCCAGCTGGGCATCGACCCGAAGAAATCCGACCAACTGGTCCGCGGTTCCGTCGTGCTGCCCGCCGGCACGGGCAAGTCCGTTCGCGTCGCCGTGTTCGCCCAGGGCGAGAAGGCCGAAGCCGCCAAGGCCGCCGGCGCCGACATCGTCGGCCTGGACGACCTGGCTGCCAGCATCAAGGCCGGCAACATCGACTTTGACGTCGTCATCGCCTCGCCCGACACCATGCGCGTCGTCGGCGCCCTGGGTCAGGTGCTGGGTCCCCGCGGCCTGATGCCGAACCCCAAGGTCGGCACCGTCACGCCCGACGTCGCCACCGCCGTGAAGAATGCCAAGGCTGGTCAGGTGCAGTACCGCACCGACAAGGCCGGCATCATTCATGCCACGATCGGCCGCGCGTCCTTTGACGTTGAAAAGCTGCAAAGCAATCTCGGCGCTCTGATCGATGCCCTGAACAAGGCCCGCCCCACGGCGGCCAAGGGCATCTATCTGCGCAAGGTTGCCGTGTCCTCCACCATGGGTGGCGGGGCGCGTGTCGAAGTGGCCTCGCTGGCCGCCTAA
PROTEIN sequence
Length: 232
MAKLSKRAAAIAAKIDRTKLYPVAEALTLVKETATAKFDESIDVAVQLGIDPKKSDQLVRGSVVLPAGTGKSVRVAVFAQGEKAEAAKAAGADIVGLDDLAASIKAGNIDFDVVIASPDTMRVVGALGQVLGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKAGIIHATIGRASFDVEKLQSNLGALIDALNKARPTAAKGIYLRKVAVSSTMGGGARVEVASLAA*