name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_411_curated_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..80
|
Protein translocase subunit SecE n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXM3_PUSST
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
|
|
scnpilot_solids1_trim150_scaffold_411_curated_2
unknown
|
Not on your lists |
278..658
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_411_curated_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
673..1206
|
transcription antitermination protein NusG n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D2DCE4
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
|
|
scnpilot_solids1_trim150_scaffold_411_curated_4
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1299..1733
|
50S ribosomal protein L11 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHT7_ADVKW
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1736..2431
|
50S ribosomal protein L1 n=1 Tax=Bordetella avium (strain 197N) RepID=RL1_BORA1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
|
|
scnpilot_solids1_trim150_scaffold_411_curated_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2660..3184
|
50S ribosomal protein L10 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXL9_PUSST
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
|
|
scnpilot_solids1_trim150_scaffold_411_curated_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3258..3638
|
50S ribosomal protein L7/L12 n=3 Tax=Alcaligenes RepID=J0BG51_ALCFA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
|
|
scnpilot_solids1_trim150_scaffold_411_curated_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3759..7907
|
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CDM22634.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F3A3B7
|
|
scnpilot_solids1_trim150_scaffold_411_curated_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7907..12166
|
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CDM22633.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
DNA-directed RNA polymerase; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U8B0_9BURK
|
|
scnpilot_solids1_trim150_scaffold_411_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12258..13463)
|
Mandelate racemase/muconate lactonizing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTU5_VARPS
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ACS18295.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13532..14449
|
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037FCAFF
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18294.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14523..15341
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Shikimate dehydrogenase n=1 Tax=Thauera sp. 27 RepID=N6YKZ8_9RHOO
|
|
scnpilot_solids1_trim150_scaffold_411_curated_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15385..16305)
|
Putative transport protein permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIC0_AZOBR
putative transport protein; permease of the drug/metabolite transporter (DMT) superfamily
Putative transport protein permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CCC97023.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_14
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16542..17672
|
C4-dicarboxylate ABC transporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B48753
Trap dicarboxylate transporter-dctp subunit {ECO:0000313|EMBL:EEX12712.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
TRAP dicarboxylate family transporter subunit DctP
|
|
scnpilot_solids1_trim150_scaffold_411_curated_15
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17697..19724
|
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14]
hydantoinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B786F3
5-oxoprolinase {ECO:0000313|EMBL:ACM01856.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_16
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19721..21418
|
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AAZ65569.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AAZ65569.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
methylhydantoinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B41173
|
|
scnpilot_solids1_trim150_scaffold_411_curated_17
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21449..21970
|
C4-dicarboxylate ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2F9B5
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:EEX12681.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
tripartite ATP-independent periplasmic transporter DctQ
|
|
scnpilot_solids1_trim150_scaffold_411_curated_18
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22002..23309
|
C4-dicarboxylate ABC transporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6B5D1
Trap dicarboxylate transporter, dctm subunit {ECO:0000313|EMBL:EEX13052.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
TRAP dicarboxylate transporter subunit DctM
|
|
scnpilot_solids1_trim150_scaffold_411_curated_19
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23335..23976
|
Transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NU59_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EKF42865.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transcriptional regulator, XRE family
|
|
scnpilot_solids1_trim150_scaffold_411_curated_20
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23984..25777
|
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI00037AC103
Gamma-glutamyltransferase {ECO:0000313|EMBL:CDR17536.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_21
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25762..27063
|
FAD-dependent oxidoreductase n=1 Tax=Burkholderia bryophila RepID=UPI0003758F7F
FAD dependent oxidoreductase
FAD binding domain protein {ECO:0000313|EMBL:AJX00117.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
|
|
scnpilot_solids1_trim150_scaffold_411_curated_22
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27141..27947)
|
xylose isomerase n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028A0F9A
Xylose isomerase {ECO:0000313|EMBL:EZI27584.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extremaustralis 14-3 substr. 14-3b.;"
xylose isomerase domain-containing protein
|
|
scnpilot_solids1_trim150_scaffold_411_curated_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27987..28640)
|
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I543_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDM22627.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
TetR family transcriptional regulator
|
|
scnpilot_solids1_trim150_scaffold_411_curated_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28633..29079)
|
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000313|EMBL:CDM22622.1};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
3-dehydroquinate dehydratase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002DE5978
|
|
scnpilot_solids1_trim150_scaffold_411_curated_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29153..30169)
|
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Thauera sp. 63 RepID=N6YBZ7_9RHOO
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CDM22621.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
TRAP dicarboxylate transporter subunit DctP
|
|
scnpilot_solids1_trim150_scaffold_411_curated_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30193..31473)
|
dehydroascorbate transporter n=1 Tax=Caldimonas manganoxidans RepID=UPI00037982D5
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CDM22620.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
TRAP dicarboxylate transporter subunit DctM
|
|
scnpilot_solids1_trim150_scaffold_411_curated_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31470..31979)
|
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00035DD475
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22619.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
tripartite ATP-independent periplasmic transporter dctq component
|
|
scnpilot_solids1_trim150_scaffold_411_curated_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32009..32902)
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000313|EMBL:CDM22618.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Quinate/shikimate 5-dehydrogenase I delta (EC:1.1.1.25)
Shikimate dehydrogenase n=4 Tax=Ralstonia solanacearum RepID=M4V423_RALSL
|
|
scnpilot_solids1_trim150_scaffold_411_curated_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33054..33935)
|
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:CDM22615.1}; EC=1.13.11.27 {ECO:0000313|EMBL:CDM22615.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
bllY; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Duganella zoogloeoides RepID=UPI00037031A4
|
|
scnpilot_solids1_trim150_scaffold_411_curated_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34318..34692
|
30S ribosomal protein S12 n=1 Tax=Pelistega sp. HM-7 RepID=V8G6I3_9BURK
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
rpsL; 30S ribosomal protein S12
|