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scnpilot_solids1_trim150_scaffold_411_curated_12

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 14523..15341

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 269.0
  • Bit_score: 330
  • Evalue 2.70e-87
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 275.0
  • Bit_score: 296
  • Evalue 9.60e-78
Shikimate dehydrogenase n=1 Tax=Thauera sp. 27 RepID=N6YKZ8_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 270.0
  • Bit_score: 303
  • Evalue 1.90e-79

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGACCGACCGTTACGCCGTCATCGGCAATCCGATTGCCCAGTCCAAATCGCCCATCATCCATGCGGCCTTCGCCCGGCAGTTCGGCCATGACATCCGCTACGAGGCCCTGCTGGCCGAACCCGGCGACTTCGAACGGACGGTGCGGGATTTCGCGACCGCCGGCGGCCGGGGCATGAACGTCACCGCGCCATTCAAGCTGGACGCCCTGGCCCTGTCCGATCGCCTCAGCGACCGGGCGCGGGCCGCCCAGGCGGTGAACACCCTGAGCTTCATGCCGGACGGCATCGTGGGCGACAACACGGACGGCTTCGGGCTGGTCTTCGATATCCAGAACCGTCTGGGCATGCCGCTGGCGGGCCGGCGCGTCCTGATCGTCGGGGCGGGCGGCGCGGCGCGCGGCGTCCTGCTGCCGGTGCTGCAGGCCGGCCCGGCCAGCCTGCTGATCGTCAATCGCAGCGAAGAAAAAGCCCGCGCCCTGGCCGAACCCTGGCAGGATGCCCATCCGGTCGCGGCGGGCGGCCTGCCGGCGGCGCGCGGCGGGCGGTTCGACGTCGTCATCAATGCGACGTCGACGGGCCTGTCCGACTGCGCCCTGGATCTGGGCCAGGGCCTGTACGCGCCGGGGGCGCTGGCCTACGAGATGGTGTATGGGCGCGAGACGCCGTTCATGGCGGACGCCCGAGCGCAGGGGGCGGCGGTGGCCGACGGCCTGGGCATGCTGGTGGGGCAGGCGGCGGAATCCTTCCGGATCTGGCGCGGCGTCATGCCGGATGTCGCTCGGACGATGGCTCAGCTGAAATCGGCATTTCCCGGTTAA
PROTEIN sequence
Length: 273
MTDRYAVIGNPIAQSKSPIIHAAFARQFGHDIRYEALLAEPGDFERTVRDFATAGGRGMNVTAPFKLDALALSDRLSDRARAAQAVNTLSFMPDGIVGDNTDGFGLVFDIQNRLGMPLAGRRVLIVGAGGAARGVLLPVLQAGPASLLIVNRSEEKARALAEPWQDAHPVAAGGLPAARGGRFDVVINATSTGLSDCALDLGQGLYAPGALAYEMVYGRETPFMADARAQGAAVADGLGMLVGQAAESFRIWRGVMPDVARTMAQLKSAFPG*