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scnpilot_solids1_trim150_scaffold_411_curated_9

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 7907..12166

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CDM22633.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 999.99
  • Bit_score: 2656
  • Evalue 0.0
DNA-directed RNA polymerase; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 999.99
  • Bit_score: 2476
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U8B0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 999.99
  • Bit_score: 2483
  • Evalue 0.0

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4260
ATGAAAGCGCTACTCGATCTCTTCAAGCAAGTCTCCCAAGACGAGCAATTCGACGCCATCCGCATCGGGATTGCTTCGCCCGAGAAGATCCGTTCGTGGTCTTTCGGCGAGGTCCGCAAGCCCGAGACCATCAACTACCGCACGTTCAAGCCCGAACGCGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCATCGCGGCGTCATCTGCGAAAAGTGCGGCGTCGAAGTCACGGTGGCGAAGGTCCGCCGCGAACGCATGGGCCACATCGAACTGGCCAGCCCGGTCGCGCACATCTGGTTCCTGAAGTCCCTGCCGTCGCGGCTGGGCATGGTGCTGGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTTGAAGCCTGGTGCGTGATCGAACCCGGCATGACGCCGCTCAAGCGCGGCCAGATCATGTCCGACGACGACTACCTGTCCAAGACGGAAGAATACGGCGACGACTTCCACGCCCTGATGGGCGCGGAAGCCGTGCGCGAACTGCTGCGCACCATCGACATCGATTCCGAAGTCGAGAAACTGCGCGGCGAGCTCAAGGCCACGGGTTCCGACGCCAAGATCAAGAAGATCTCCAAGCGCCTGAAGGTCCTGGAAGGCTTCCAGAAGTCCGGCATCAAGCCCGACTGGATGATCATGGAAGTCCTGCCGGTGCTGCCGCCGGACCTGCGGCCCCTGGTGCCGCTGGACGGCGGGCGCTTCGCCACGTCCGATCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACAACCGCCTGAAGCGCCTGCTGGAACTCAAGGCTCCGGACATCATCCTGCGCAACGAAAAGCGCATGCTGCAGGAATCCGTGGATTCGCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACCGGCGCCAACAAGCGCCAGCTGAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGGCGCTTCCGTCAGAACCTGCTGGGCAAGCGCGTCGACTACTCCGGCCGTTCCGTGATCGTGGTGGGCCCGCAGCTGCGCCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTGGAACTGTTCAAGCCCTTCATTTTCAATCGTCTGGAAATGATGGGTCTGGCGACCACCATCAAGGCGGCGAAGAAACTGGTCGAGAGCCAGGAACCCGTCGTCTGGGACATCCTGGAAGAAGTCATTCGCGAACACCCGGTCATGCTGAACCGGGCGCCGACCCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGCAGCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTGGTCTGCGCGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCCCTGGAAGCCCAGCTGGAAGCCCGCACCCTGATGCTGGCGTCCAACAACGTGCTGTTCCCGGCCAACGGCGAACCGGCCATCGTGCCGTCCCAGGACATCGTGCTGGGCCTGTACTATGCCTCGCGTGAACGCATCAACGGCAAGGGCGAGGGCATGTTCCTGGCCGACCTGGCCGAGGTCCAGCGCGCCTACGACAACCACGAAGTCGAGCTGCAGACCCGCATCACGACGCGCGTGCCGGAATACACCAAGGGCGAGGACGGCGAGTGGAAGCAGGAAGTCCACCGCTATCAGACCACGGTGGGCCGCGCGCTGCTGTCCGAGATCCTGCCGCAGGGCCTGCCGTTCACCGTGCTGAACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTCATCAACATGTGCTATCGCCGTTGCGGCCTGCGGGCCACGGTGATCTTCGCCGACAAGCTGATGCAGTCCGGCTACCGCCTGGCCACCCGCGCGGGCGTGTCCATCGCCATGGGCGACATGGTGGTGCCCGACGCCAAGCGCGACATCCTGGCGCAGGCCTCCAGCGAAGTGAAGGAAATCGACCGCCAGTACTCCTCCGGTCTGGTCACCGCCCAGGAACGCTACAACAACGTGGTGGACATCTGGGGCAAGGCCGGCGACCGCGTGGGCAAGGCCATGATGGAACAGCTCTCCACCGAGCCGGTCATCGACCGCCACGGCAAGGAAGTGCGCCAGGAATCCTTCAATTCCATCTACATGATGGCCGACTCCGGCGCCCGGGGTTCCGCCGCCCAGATCCGCCAGCTGGCGGGGATGCGCGGCCTGATGGCCAAGCCGGACGGCTCCATCATCGAAACCCCGATCACGGCCAACTTCCGGGAAGGCCTGAACGTGCTGCAGTACTTCATCTCGACGCACGGCGCGCGTAAAGGCCTGGCCGACACGGCGCTGAAGACCGCCAACTCCGGTTACCTGACCCGCCGTCTGGTGGACGTGACCCAGGACCTGGTCATCACCGAGGACGATTGCGGCACCACGCACGGCTACGTGATGAAGGCCCTGCTGGAAGGCGGCGAAGTCGTCGAAGCCCTGCGCGACCGCGTGCTGGGCCGGGTGGCGGCCATCGACATCGTCAATCCGGACACTCAGGAAACCGTCATTCCGGCCGGCACGCTGCTGGACGAGAACAAGGTCGAACTGATCGACGAGCTGGGCATCGACGAAGTCAAGATCCGCACGCCGCTGACCTGCGAAACCCGCCATGGCCTGTGCGCCCATTGTTATGGGCGTGATCTGGGTCGCGGTTCCCTGGTCAACAAGGGCGAAGCGGTCGGCGTGATCGCCGCCCAGTCCATCGGCGAGCCGGGCACGCAGCTGACGATGCGGACCTTCCACATCGGCGGCGCGGCCTCGCGTTCGGCGCTGGCCAGCTCGATCGAGACCAAGTCCGCCGGTTCGGTGGGCTTCGCCATCGGCCTGCGCTACCTGACCAATGCCAAGGGCGACCGCATCGCGGTGTCGCGGTCCGGCGAAATCGTCGTCTATGACGACAACCGTCGCGAACGCGAACGCCACAAGGTTCCCTACGGCGCCACCATCCTGGTGGGCGACGGCGACACCATCAAGGCCGGCGCCAAGCTGGCTTCCTGGGATCCGCTGACCCGCCCGATCGTGTCCGAATACACCGGCACGATCCGCTTCGCCAACATCGAGGAAGGCGTGACCGTCGCCCGTCAGGTCGACGAAATCACGGGCCTGTCCACGCTGGTGGTGATCACGCCCAAGACGCGCAGCACCAAGGGCGCGGCGCGTCCGCAGATCCTGCTGCTGGACGAGCAGGGCCAGGAAATCAAGGTCGCCGGCACCGACCACGCCGTGGCGATCTCGTTGCCCGTGGGCGCCCTGATCACCGTGCGCGACGGCCAGGCCGTCGGCGTGGGCGACTTCCTGGCGCGGATTCCACAGGAATCGCAGAAGACCCGCGACATCACGGGCGGTCTGCCGCGCGTGGCCGAACTGTTCGAAGCCCGTTCCCCGAAGGACGCCGGCGTGCTGGCCGAAATCACCGGCACGGTGTCGTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTCATCACCGACATGGACGGCGTCAGCCACGAGTTCCTGATTTCCAAGGAAAAGCAGGTGCTGGTGCACGACGGCCAGGTGGTCAACAAGGGCGAACTGATCGTCGACGGTCCGGCCGACCCGCACGACATCCTGCGTCTGCAGGGCATCGAGCCGCTGGCCTCCTACGTGGTCAACGAAGTCCAGGACGTCTATCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAAGTCATCGTGCGTCAGATGCTGCGTCGCGTGAACATCACCAATGCGGGCGATACGGAATTCATCACCGGCGAACAGGTTGAACGCGCCGAGCTGCTGAATGCCAACGACCGCATGGAAGCCGAGGGCAAGATCCCGGCCACGTACGACAACGTGCTGCTGGGGATCACCAAGGCCTCGCTGTCCACGGATTCGTTCATCTCCGCCGCTTCCTTCCAGGAAACGACCCGGGTGCTGACCGAAGCCGCCATCATGGGCAAGCGCGACGAACTGCGCGGCCTGAAGGAAAACGTCATCGTGGGTCGCCTGATCCCGGCGGGTACCGGTATGTCCTACCATATCGCCCGCCACGAAAAGGAGATCTTCGAGGCCGCCGAACGGGCCGCCGCGCGCGAGCTGGCCAATCCGTTCGCCGATCCTTCGGAAATGGCCCATGTGGGTACCGACGAGGCCGGCAGCGATGCCGACCCGGCTGCGGATTCGGATTCGCCGTCCGAAGAATAA
PROTEIN sequence
Length: 1420
MKALLDLFKQVSQDEQFDAIRIGIASPEKIRSWSFGEVRKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLKRGQIMSDDDYLSKTEEYGDDFHALMGAEAVRELLRTIDIDSEVEKLRGELKATGSDAKIKKISKRLKVLEGFQKSGIKPDWMIMEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIILRNEKRMLQESVDSLLDNGRRGKAMTGANKRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQLRLHQCGLPKLMALELFKPFIFNRLEMMGLATTIKAAKKLVESQEPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARTLMLASNNVLFPANGEPAIVPSQDIVLGLYYASRERINGKGEGMFLADLAEVQRAYDNHEVELQTRITTRVPEYTKGEDGEWKQEVHRYQTTVGRALLSEILPQGLPFTVLNKALKKKEISKLINMCYRRCGLRATVIFADKLMQSGYRLATRAGVSIAMGDMVVPDAKRDILAQASSEVKEIDRQYSSGLVTAQERYNNVVDIWGKAGDRVGKAMMEQLSTEPVIDRHGKEVRQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVITEDDCGTTHGYVMKALLEGGEVVEALRDRVLGRVAAIDIVNPDTQETVIPAGTLLDENKVELIDELGIDEVKIRTPLTCETRHGLCAHCYGRDLGRGSLVNKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSALASSIETKSAGSVGFAIGLRYLTNAKGDRIAVSRSGEIVVYDDNRRERERHKVPYGATILVGDGDTIKAGAKLASWDPLTRPIVSEYTGTIRFANIEEGVTVARQVDEITGLSTLVVITPKTRSTKGAARPQILLLDEQGQEIKVAGTDHAVAISLPVGALITVRDGQAVGVGDFLARIPQESQKTRDITGGLPRVAELFEARSPKDAGVLAEITGTVSFGKDTKGKQRLVITDMDGVSHEFLISKEKQVLVHDGQVVNKGELIVDGPADPHDILRLQGIEPLASYVVNEVQDVYRLQGVKINDKHIEVIVRQMLRRVNITNAGDTEFITGEQVERAELLNANDRMEAEGKIPATYDNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMSYHIARHEKEIFEAAERAAARELANPFADPSEMAHVGTDEAGSDADPAADSDSPSEE*