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scnpilot_solids1_trim150_scaffold_411_curated_28

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(32009..32902)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000313|EMBL:CDM22618.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 293.0
  • Bit_score: 454
  • Evalue 1.30e-124
Quinate/shikimate 5-dehydrogenase I delta (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 291.0
  • Bit_score: 344
  • Evalue 3.40e-92
Shikimate dehydrogenase n=4 Tax=Ralstonia solanacearum RepID=M4V423_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 291.0
  • Bit_score: 344
  • Evalue 1.10e-91

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCGACTCACCACTGAAAAACCCGCCCTGCTGCTTGGCCTGATCGGAGAAGGGATCCGCGAATCCCTCAGTCCGACCCTGTACGAAGACGAGGCCGCCCATCACGGCATCCTGTGCCTCTACCAGCGCATCGACCTGGACGCCCTGCGCCTGACCCCCGCCGCCCTGCCGGAACTCCTCACCTCGGCGGAACGGCTGGGATTCACCGGGCTCAACATCACGCACCCCTGCAAGCAGGCGGTCATCGGGCACCTGGACGAACTCTCGGACGAGGCGCGCGCCATCGGCGCCGTCAACACCGTCGTGCTGCGCGACGGCCGGCGCATCGGCCACAACACCGACCACTACGGCTTCACGCGGAACATGCAGCGGCACATGGCCGGCCGCGCGCTCGGGCATGTCGTCCAGCTGGGCGCGGGCGGCGCCGGGGCGGCGGTGGCCGACGCGGTCCTGCGCCTGGGAGCCAGCCGCCTGACGCTCTTCGACCTGTCGACGGAACGGGCGCGGGATCTGGTCCGGACGCTGCGGGCGCGCTTTCCGGACGCCGCCGTCGAAACCGGCGGCGACCCGGCCGAGGCCATGCGGCAAGCGGACGGCCTGGTCAACGCCACGCCGATCGGCATGGCCAGCCACCCGGGCACGCCGCTGCCGCCGGAACTGCTGGAGCCCCGGCACTGGTTCGCGGAGATCATCTATTTCCCGCTGGAAACCGAACTGCTGCGGATCGCCCGCGCCAAAGGCTGCCACACCATCGACGGCATCGGCATGGTCGTGCACCAGGCCGCGCGCGCCTTCGAGCTCTACACCGGCGGCATTCCCGCCGACAGCGCGCGCATGACCGACCATGTCACCCAGGTCCTGAAACGCCGGGCGGCCGCCCGCCAGGGCTGCTGA
PROTEIN sequence
Length: 298
MRLTTEKPALLLGLIGEGIRESLSPTLYEDEAAHHGILCLYQRIDLDALRLTPAALPELLTSAERLGFTGLNITHPCKQAVIGHLDELSDEARAIGAVNTVVLRDGRRIGHNTDHYGFTRNMQRHMAGRALGHVVQLGAGGAGAAVADAVLRLGASRLTLFDLSTERARDLVRTLRARFPDAAVETGGDPAEAMRQADGLVNATPIGMASHPGTPLPPELLEPRHWFAEIIYFPLETELLRIARAKGCHTIDGIGMVVHQAARAFELYTGGIPADSARMTDHVTQVLKRRAAARQGC*