ggKbase home page

scnpilot_solids1_trim150_scaffold_144_curated_20

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22846..23880)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTM2_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 326.0
  • Bit_score: 461
  • Evalue 9.10e-127
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 346.0
  • Bit_score: 573
  • Evalue 2.30e-160
hypothetical protein; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 326.0
  • Bit_score: 461
  • Evalue 2.80e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGTCCGCACCCACTCCCGACTTCCAGGCGTCCGGCGCCGCCGAACACGGCCACGCCGCCGCGCTCGGGGACGCCGCCGCGCGTCCCGCCCGCCACAGCGTCAACGAAAACAAGCTGGTCAAGCGGCTGCTGCGCGAAACCGGCAAGGCCATCGGCGACTACCGGATGATCGAGGACGGCGACCGCGTCATGGTCTGCCTGTCGGGCGGCAAGGATTCCTACGGCCTGCTGGACATTCTGCTGACGCTGCGCGAACGCGCGCCCATCCATTTCGACGTCATCGCCGTCAATCTGGACCAGAAGCAGCCGGGGTTTCCCGAACACGTGCTGCCCGACTACCTGAGCGCGCGCGGCATCCCCTTCCACATCGAGAACCGGGACACATATTCCGTGGTCAAGCGCCTCGTCCCGGAAGGCAAGACGACCTGCTCCCTGTGTTCGCGCCTGCGCCGGGGCATCCTGTACCGCGTGGCCCGCGAACTGGGCGCCACCAAGATCGCCCTGGGCCACCACCGCAACGACATCCTGGCGACCTTCTTCCTGAACCTGTTCTACGGCGGCCGCATGAAGGCCATGCCCCCGAAGCTGGTGTCGGACAACGGCGAGCACATCGTCATCCGGCCACTGGCCTACGTGCGCGAGAAAGACCTGATCGCCTACGCGCGGCTGCGCGAGTTTCCCATCATTCCCTGCAACCTGTGCGGTTCCCAGGAAAACCTGAAGCGCAAGGAAATCAACCGCATGCTCGAAGAATGGGACCGGCACTTCGGCAACCGCACCTGGAACGTGTTCCGCGCGCTGTCGCACGTCGTGCCGTCCCATCTGATGGACCCCGCCCTGATGGATTTCGGCGGCCTGCGCCCGACGGGCCGGGCCGACGCCGACGGCGACCGGGCATTCGACGAGGAAGACTTCCCGATGCCGGCGTTCGCGGAAGAGGAGGGGGCGGCGGACGGCGAGCACGGCTCGCTCGGCCGGGAGCCGGTCGAGCGGATCATCGCCCGGCCGCGCGTGCGGTCGCAGGAATCATCCTAA
PROTEIN sequence
Length: 345
MSAPTPDFQASGAAEHGHAAALGDAAARPARHSVNENKLVKRLLRETGKAIGDYRMIEDGDRVMVCLSGGKDSYGLLDILLTLRERAPIHFDVIAVNLDQKQPGFPEHVLPDYLSARGIPFHIENRDTYSVVKRLVPEGKTTCSLCSRLRRGILYRVARELGATKIALGHHRNDILATFFLNLFYGGRMKAMPPKLVSDNGEHIVIRPLAYVREKDLIAYARLREFPIIPCNLCGSQENLKRKEINRMLEEWDRHFGNRTWNVFRALSHVVPSHLMDPALMDFGGLRPTGRADADGDRAFDEEDFPMPAFAEEEGAADGEHGSLGREPVERIIARPRVRSQESS*