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scnpilot_solids1_trim150_scaffold_144_curated

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_144_curated_1
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(675..926)
DNA (252bp) protein (84aa)
Antitoxin component of the ChpB-ChpS toxin-antitoxin system n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J984_9BURK
Antitoxin component of the ChpB-ChpS toxin-antitoxin system {ECO:0000313|EMBL:CCD29331.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
mazE; transcriptional regulator/antitoxin MazE
scnpilot_solids1_trim150_scaffold_144_curated_2
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1601..4357
DNA (2757bp) protein (919aa)
lactate dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI00036BDA97
DNA modification methyltransferase {ECO:0000313|EMBL:GAJ29570.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
type II restriction enzyme, methylase subunit
scnpilot_solids1_trim150_scaffold_144_curated_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4354..4608
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLJ1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45683.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids1_trim150_scaffold_144_curated_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4598..6655
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T289_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT68005.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_144_curated_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6648..7835
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F3CDDF
Uncharacterized protein {ECO:0000313|EMBL:EIT68004.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
yeeC; hypothetical protein
scnpilot_solids1_trim150_scaffold_144_curated_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8123..9193
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N8QCZ6_9GAMM
abortive infection bacteriophage resistance protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_144_curated_7
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9321..10358)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JI68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIF42670.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_144_curated_8
unknown

Not on your lists

comp(10450..10632)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_144_curated_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..11884)
DNA (1164bp) protein (388aa)
Site-specific recombinase XerD n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PA24_9BURK
Site-specific recombinase XerD {ECO:0000313|EMBL:ELX08439.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
phage-related integrase
scnpilot_solids1_trim150_scaffold_144_curated_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12170..13111
DNA (942bp) protein (314aa)
Zinc/iron permease n=1 Tax=Pseudomonas plecoglossicida NB2011 RepID=S2K4W7_9PSED
Metal transporter, ZIP family {ECO:0000313|EMBL:CDM25306.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
divalent heavy-metal cations transporter; K07238 zinc transporter, ZIP family
scnpilot_solids1_trim150_scaffold_144_curated_11
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13159..13884)
DNA (726bp) protein (242aa)
ABC transporter n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003633066
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP44845.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_144_curated_12
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13871..14629)
DNA (759bp) protein (253aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IDI5_BORPD
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP44844.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_144_curated_13
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14626..15573)
DNA (948bp) protein (316aa)
inner-membrane translocator n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003622B4E
branched-chain amino acid transport permease; K01998 branched-chain amino acid transport system permease protein
Putative branched-chain amino acid transport permease {ECO:0000313|EMBL:CAP44843.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_144_curated_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15570..16442)
DNA (873bp) protein (291aa)
inner-membrane translocator n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003684DB7
branched-chain amino acid transport permease; K01997 branched-chain amino acid transport system permease protein
Putative branched-chain amino acid transport permease {ECO:0000313|EMBL:CAP44842.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_144_curated_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16582..17847)
DNA (1266bp) protein (422aa)
ABC transporter substrate-binding protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003635FE2
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CAP44841.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_144_curated_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18145..18459)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM25938.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_144_curated_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18672..19586
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCW2_9BURK
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM25937.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_144_curated_18
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..21162)
DNA (1545bp) protein (515aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Thauera sp. 63 RepID=N6XJA9_9RHOO
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:ENO79450.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids1_trim150_scaffold_144_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21343..22830
DNA (1488bp) protein (496aa)
Extracellular solute-binding protein family 5 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS4_ALIDB
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADV01525.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_144_curated_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22846..23880)
DNA (1035bp) protein (345aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTM2_PUSST
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA
scnpilot_solids1_trim150_scaffold_144_curated_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23891..24295)
DNA (405bp) protein (135aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDM25925.1}; EC=4.1.2.25 {ECO:0000313|EMBL:CDM25925.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
folB; hypothetical protein; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
FolB protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY27_BORPD
scnpilot_solids1_trim150_scaffold_144_curated_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24292..26088)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MNR5_BORBM
Protease, putative {ECO:0000313|EMBL:CDM25924.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_144_curated_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26114..26890
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CDM25923.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CDM25923.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTL8_PUSST
scnpilot_solids1_trim150_scaffold_144_curated_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27299..28021
DNA (723bp) protein (241aa)
Cellulose synthase operon protein YhjQ n=1 Tax=Pseudomonas sp. GM49 RepID=J2ZLI4_9PSED
Cellulose synthase, putative {ECO:0000313|EMBL:CDM25921.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
cellulose synthase
scnpilot_solids1_trim150_scaffold_144_curated_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28075..28968)
DNA (894bp) protein (298aa)
LuxR family transcriptional regulator n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000371075B
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDM25920.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_144_curated_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29095..29559)
DNA (465bp) protein (155aa)
Hemin storage system protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2G4P5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDM25919.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Biofilm PGA synthesis auxiliary protein PgaD
scnpilot_solids1_trim150_scaffold_144_curated_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29556..30890)
DNA (1335bp) protein (445aa)
Biofilm PGA synthesis N-glycosyltransferase PgaC (EC:2.4.-.-)
Glycosyl transferase, family 2 n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U7G6_ALCXX
Biofilm PGA synthesis N-glycosyltransferase PgaC {ECO:0000313|EMBL:CDM25918.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_144_curated_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30903..32924)
DNA (2022bp) protein (674aa)
pgaB; biofilm PGA synthesis lipoprotein PgaB (EC:3.-.-.-); K11931 biofilm PGA synthesis lipoprotein PgaB [EC:3.-.-.-]
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000366A851
Biofilm PGA synthesis deacetylase PgaB {ECO:0000313|EMBL:CDM25917.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_144_curated_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32938..35193)
DNA (2256bp) protein (752aa)
Outer membrane protein PgaA n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5B4_ALCXX
Biofilm PGA outer membrane secretin PgaA {ECO:0000313|EMBL:CDM25916.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Biofilm PGA outer membrane secretin PgaA
scnpilot_solids1_trim150_scaffold_144_curated_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35218..35535)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000304E531
Uncharacterized protein {ECO:0000313|EMBL:CDM25915.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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