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scnpilot_solids1_trim150_scaffold_144_curated_28

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(30903..32924)

Top 3 Functional Annotations

Value Algorithm Source
pgaB; biofilm PGA synthesis lipoprotein PgaB (EC:3.-.-.-); K11931 biofilm PGA synthesis lipoprotein PgaB [EC:3.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 678.0
  • Bit_score: 866
  • Evalue 7.50e-249
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000366A851 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 672.0
  • Bit_score: 878
  • Evalue 4.60e-252
Biofilm PGA synthesis deacetylase PgaB {ECO:0000313|EMBL:CDM25917.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 665.0
  • Bit_score: 1033
  • Evalue 0.0

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
ATGTCATCCTCCTTCATCCGACTGCGCCTGCCGCTGTGGCTCTGCTGCCTGGCGCTGCTGTCGGGCTGCGCCAGCGGCATCCCGAGCTTCACGCCGCCCTCGCAGCGGCCCGTCTCCGCCGTCGATCGCCCATGGCCCCACAACGGCCTGCTCACGCTGGCTTACCACGACATCGAAGACAGCGACCCCGACCAGACGTTCGTGGCGGTGCGCACCGACCTGTTCGTCACCCAGATGCAGTGGCTGCGCGACAACGGCTACCAGGCCGTTTCCGTGGACCAGATCCTGGCAGCCCGCAACGGCGGCGCCCCTCTGCCGCCCAAGGCCGTGCTGCTCAGCTTCGACGACGGTTTCCAGAGCTTTTACACGCGGGTCTTCCCGATCCTGAAATCCATGGGATGGCCCGCCGTCTGGGCCCCGGTCGGGAAGTGGGTGGGAACGCCGAAGAACCAGCCGGTCCTGTTCGGAACGCGGAAGGTCCCGCGCGAACGGTTCGCCACCTGGGACGAGGTCCGGCAGGTCGCCAGGTCCGGCCTGATCGAGATCGCCTCGCACACCGACAACCTGCACCATGGCATTCCGGCCGATCCACAGGGCAGCGAACAGCCGGCGGCCTCGACCCGTCGATATGACGCGCGAACCCGCTCCTACGAATCGGATGCCGCCTATCGCCAAAGGATAGGCGCCGACGTCGAAGCCATCACCCGGACGCTGCGGCGGGTGACCGGCAAGGCCCCCAGGGTCTGGGTCTGGCCGTATGGCGCCGCCAGCGGCGAGGCGCTCGACATCATCCGCCGGCACGGCTACCAGATGGCCCTGACGCTCGACGACGGCCTGGGAACGACGGACCATCCGATGTCCCTGCCGCGGATGCTGGTGACGGATTCGCCCGACATGGCGGAATTTGCGCGATCCGTGCTGGGCGTGGAGCCTCGCGCCAACGTCAGGGTGGCTCAGGTGGATCTGGATTACGTCTACGATCCCGACCCCGCGCAGATGGACAGGAACCTGGGCGCCCTGGTGCAACGGATCGCGGACCTGCAGATCAACACCGTCTTCCTGCAGGCGTTCGCCGACCCCCGGGGCGACGGTCTGGCGCGCGCGGTCTATTTCCCGAATCGCCGGCTGCCCATGCGCGCGGACCTGTTGAACCGGGCGGTCTGGCAGTTGCAGACGCGCGCCCACGTCAAGGTCTACGCCTGGATGCCGGTTCTGAGCTTCGACCTGTCGCCCGCCATCGCGCGCGTCAGCCGCTGGAACCCGGGCGACGGCAGCGCGGCCCCGTACTCCGCCCCCGGCCATTATCAGCGGCTGTCTCCATTCGATCCGCAGGCGCGGGCCGCCATCGCGGATCTGTACGAGGACATGGCGGCCAACGCGCCGATAGACGGCATTCTGTTCCACGACGACGCGCTCCTGGGCGACTACGAGGACGCCAGTCCGCCCGCGCTGGCCGCCTACCGGCGCGCCGGCCTGCCCGGATCGATCCAGGCCCTGCGGGCCGATCCCGCCACCCTGCGGCGCTGGACCCGCTTCAAGAGCCGGGCATTGATCGACTTCACCAGCCAGCTGGCCAGCCGGGTGCGGGCGATCCGCGGCCCTCAGGTCCGGACGGCGCGCAATCTCTATGCCGGCCCCGTCCTGGACCCGGCCAGCGAGTCCTGGTATGCGCAGAACCTGGACGACTTCCTGCAAACCTACGACTGGACCGTGCTCATGGCCATGCCGCTGATGGAACGGGTCCCGGCATCCGGATCCGATGCCTGGCTCGATCGCCTGGCGTCGGCGGTGGGGAGCCGCCCGGGAGCGCTGTCGCGCACCGTGTTCGAACTGCAGGCCCGCGACTGGAACCTGCCTGGCGGCCCGATGGTGGACGGCCGCGAGCTGGCCGGCTGGATGCGGCATCTGCAGCGCCTGGGCATCGAAAACTTCGGCTACTACCCGGACGACTTCATACAGAACCGGCCCGCCCTGCGGATCATCCGGCCGGCGATCTCCAAGGCCTGGTATCCCTACCAATGA
PROTEIN sequence
Length: 674
MSSSFIRLRLPLWLCCLALLSGCASGIPSFTPPSQRPVSAVDRPWPHNGLLTLAYHDIEDSDPDQTFVAVRTDLFVTQMQWLRDNGYQAVSVDQILAARNGGAPLPPKAVLLSFDDGFQSFYTRVFPILKSMGWPAVWAPVGKWVGTPKNQPVLFGTRKVPRERFATWDEVRQVARSGLIEIASHTDNLHHGIPADPQGSEQPAASTRRYDARTRSYESDAAYRQRIGADVEAITRTLRRVTGKAPRVWVWPYGAASGEALDIIRRHGYQMALTLDDGLGTTDHPMSLPRMLVTDSPDMAEFARSVLGVEPRANVRVAQVDLDYVYDPDPAQMDRNLGALVQRIADLQINTVFLQAFADPRGDGLARAVYFPNRRLPMRADLLNRAVWQLQTRAHVKVYAWMPVLSFDLSPAIARVSRWNPGDGSAAPYSAPGHYQRLSPFDPQARAAIADLYEDMAANAPIDGILFHDDALLGDYEDASPPALAAYRRAGLPGSIQALRADPATLRRWTRFKSRALIDFTSQLASRVRAIRGPQVRTARNLYAGPVLDPASESWYAQNLDDFLQTYDWTVLMAMPLMERVPASGSDAWLDRLASAVGSRPGALSRTVFELQARDWNLPGGPMVDGRELAGWMRHLQRLGIENFGYYPDDFIQNRPALRIIRPAISKAWYPYQ*