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scnpilot_solids1_trim150_scaffold_144_curated_50

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(52564..53388)

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Pseudomonas extremaustralis RepID=UPI00028A0F9A similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 266.0
  • Bit_score: 289
  • Evalue 4.90e-75
Uncharacterized protein {ECO:0000313|EMBL:AJE22815.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 269.0
  • Bit_score: 289
  • Evalue 5.30e-75
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 268.0
  • Bit_score: 278
  • Evalue 2.70e-72

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Taxonomy

Azotobacter chroococcum → Azotobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAAACGCCGCTATTCACTGGCCCAGCTCACCACCCTGGAACTCGCCCCCCCCGCCATGATCAGCACAGCATACAGAACCGGCTACCAAGCGTGCGGCATCCGCCTGCTGCCAGTCAGTCCCGGCGGGGTCGGCTACCCGCTCATGGACGATCCAGCGCTGCTGAAGGAAACACTGGCCCGAATGGGCGATACCGGTGTCCGGATTGCCGATCTGGAAATCATCCGCCTCACCGATTCGTTCAATGTGGGGGATTACATGGCATTTTTTGAAGTAGGCCAGAAACTGGGGGCATCCAATATTCTGGTGGCCGGCAACGACACCCATGAAGCCCGCGCGACCGAATCCTTCGCCCGGCTCTGTGAAGCCTGCAAGCCGTACGGACTGACGGCCGACATCGAATTCATGCCTTGGCTACCCGTGGACCGAATCTCCGCAGCGCAACGCATCGTGGAAGCCGCCGGCCAGACCAACGGCGGAGTCCTGGTCGATCCTCTGCACTTCGCGCGTTCCGCCAGCACGCTGGACGAGCTCGCAGCCCTGCCCGGATCCATGATTCACTACGCGCAAATCTGCGACGCGCCGGCTGGCATCCCTTCCGAGACGTCAGATCTCATCCACGCAGCGCGCTGCGCCCGCCTGCCGACGGGTGAAGGCGGCATCGACCTGAAAGCGATCTTCGAACGGATCCCGCCAGAAACGCTCATCAGCGTGGAGATCCCCAACGACGAACTGCGCGCGGGCATGAGCGCCGAAGCCTGGGCGGAGCGCTGCCTCAGGACGTCGAAACAGCTGCTTGATCAGATCGACGCGGAGAACCGCTAG
PROTEIN sequence
Length: 275
MKRRYSLAQLTTLELAPPAMISTAYRTGYQACGIRLLPVSPGGVGYPLMDDPALLKETLARMGDTGVRIADLEIIRLTDSFNVGDYMAFFEVGQKLGASNILVAGNDTHEARATESFARLCEACKPYGLTADIEFMPWLPVDRISAAQRIVEAAGQTNGGVLVDPLHFARSASTLDELAALPGSMIHYAQICDAPAGIPSETSDLIHAARCARLPTGEGGIDLKAIFERIPPETLISVEIPNDELRAGMSAEAWAERCLRTSKQLLDQIDAENR*