ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 451-500 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_15799_curated Species: Hassallia byssoidea (50%)	2	2078 bp	39.80	1.00	90.38
scnpilot_solids1_trim150_scaffold_12692_curated Species: Epilithonimonas sp. FH1 (50%)	4	2238 bp	43.12	1.00	90.35
scnpilot_solids1_trim150_scaffold_34233_curated Species: Saprospira grandis (50%)	2	1169 bp	37.55	1.00	90.33
scnpilot_solids1_trim150_scaffold_16916_curated Species: Chryseobacterium sp. JM1 (50%)	2	1803 bp	36.22	1.00	90.18
scnpilot_solids1_trim150_scaffold_15260_curated Species: Flavobacterium sp. CF136 (50%)	2	2129 bp	42.32	1.00	89.90
scnpilot_solids1_trim150_scaffold_20559_curated Species: R_Fluviicola_43_260 (100%)	1	1724 bp	38.63	1.00	89.79
scnpilot_solids1_trim150_scaffold_35895_curated Species: Polaribacter sp. Hel1_85 (100%)	1	1153 bp	35.91	1.00	89.77
scnpilot_solids1_trim150_scaffold_23032_curated Class: Flavobacteriia (66.67%)	3	1591 bp	40.48	1.00	89.75
scnpilot_solids1_trim150_scaffold_30876_curated Species: R_Fluviicola_43_260 (50%)	2	1174 bp	36.12	1.00	89.69
scnpilot_solids1_trim150_scaffold_8672_curated Order: Flavobacteriales (50%)	4	3202 bp	33.95	1.00	89.66
scnpilot_solids1_trim150_scaffold_34490_curated Species: Fluviicola taffensis (50%)	2	1044 bp	33.24	1.00	89.66
scnpilot_solids1_trim150_scaffold_10279_curated Species: Formosa sp. AK20 (100%)	2	2730 bp	40.59	1.00	89.56
scnpilot_solids1_trim150_scaffold_21518_curated Species: Fluviicola taffensis (100%)	3	1635 bp	36.33	1.00	89.54
scnpilot_solids1_trim150_scaffold_37545_curated Species: Alistipes indistinctus (50%)	2	1046 bp	43.98	1.00	89.48
scnpilot_solids1_trim150_scaffold_25743_curated Species: Epilithonimonas lactis (50%)	2	1415 bp	38.09	1.00	89.47
scnpilot_solids1_trim150_scaffold_17001_curated Species: Flavobacterium sp. EM1308 (50%)	4	1840 bp	41.30	1.00	89.35
scnpilot_solids1_trim150_scaffold_14820_curated Genus: Chryseobacterium (50%)	4	2046 bp	39.49	1.00	89.15
scnpilot_solids1_trim150_scaffold_41560_curated Species: Chryseobacterium taiwanense (50%)	2	899 bp	38.82	1.00	89.10
scnpilot_solids1_trim150_scaffold_9786_curated Species: Flavobacterium sp. 316 (50%)	2	2917 bp	36.92	1.00	89.06
scnpilot_solids1_trim150_scaffold_33110_curated Species: Flavobacterium sp. F52 (100%)	1	1233 bp	48.09	1.00	89.05
scnpilot_solids1_trim150_scaffold_18146_curated Species: Chryseobacterium solincola (50%)	2	1880 bp	39.63	1.00	89.04
scnpilot_solids1_trim150_scaffold_9956_curated Species: GWA2_Bacteroidetes_31_9_curated (50%)	2	3426 bp	38.85	1.00	88.97
scnpilot_solids1_trim150_scaffold_17100_curated Order: Flavobacteriales (66.67%)	3	1963 bp	40.40	1.00	88.79
scnpilot_solids1_trim150_scaffold_20857_curated Species: RLO_Flavobacteria_35_11 (100%)	1	1497 bp	50.23	1.00	88.78
scnpilot_solids1_trim150_scaffold_30913_curated Species: Chryseobacterium sp. CF314 (50%)	2	1156 bp	43.43	1.00	88.75
scnpilot_solids1_trim150_scaffold_42843_curated Species: Polaribacter sp. Hel1_85 (100%)	1	1011 bp	31.06	1.00	88.72
scnpilot_solids1_trim150_scaffold_39787_curated Species: Fluviicola taffensis (50%)	2	984 bp	39.94	1.00	88.72
scnpilot_solids1_trim150_scaffold_36732_curated Species: R_Fluviicola_43_260 (50%)	2	1045 bp	36.56	1.00	88.71
scnpilot_solids1_trim150_scaffold_35572_curated Species: Galbibacter marinus (50%)	2	1161 bp	34.80	1.00	88.63
scnpilot_solids1_trim150_scaffold_26223_curated Species: Fluviicola taffensis (100%)	1	1449 bp	42.17	1.00	88.61
scnpilot_solids1_trim150_scaffold_29679_curated Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	1324 bp	39.05	1.00	88.60
scnpilot_solids1_trim150_scaffold_22607_curated Order: Flavobacteriales (66.67%)	3	1612 bp	37.22	1.00	88.59
scnpilot_solids1_trim150_scaffold_5472_curated Species: Fluviicola taffensis (50%)	6	4509 bp	36.93	1.00	88.42
scnpilot_solids1_trim150_scaffold_35690_curated Order: Flavobacteriales (66.67%)	3	1158 bp	41.54	1.00	88.34
scnpilot_solids1_trim150_scaffold_35327_curated Species: R_Fluviicola_43_260 (100%)	2	1026 bp	36.74	1.00	88.30
scnpilot_solids1_trim150_scaffold_26358_curated Order: Flavobacteriales (66.67%)	3	1444 bp	38.71	1.00	88.30
scnpilot_solids1_trim150_scaffold_35822_curated Species: Fluviicola taffensis (66.67%)	3	1155 bp	40.00	1.00	88.05
scnpilot_solids1_trim150_scaffold_33468_curated Species: Chryseobacterium indologenes (66.67%)	3	1094 bp	41.32	1.00	88.03
scnpilot_solids1_trim150_scaffold_30755_curated Species: Aequorivita sublithincola (50%)	2	1292 bp	39.63	1.00	88.00
scnpilot_solids1_trim150_scaffold_3804_curated Species: Chryseobacterium indologenes (71.43%)	7	5687 bp	37.37	1.00	87.99
scnpilot_solids1_trim150_scaffold_17777_curated Species: Kordia algicida (50%)	2	1908 bp	44.39	1.00	87.89
scnpilot_solids1_trim150_scaffold_41325_curated Species: R_Fluviicola_43_260 (50%)	2	1038 bp	35.65	1.00	87.86
scnpilot_solids1_trim150_scaffold_33745_curated Species: Chryseobacterium antarcticum (50%)	2	1206 bp	39.30	1.00	87.81
scnpilot_solids1_trim150_scaffold_28692_curated Species: Flavobacterium indicum (50%)	2	1279 bp	35.50	1.00	87.72
scnpilot_solids1_trim150_scaffold_27636_curated Species: Fluviicola taffensis (50%)	2	1119 bp	39.59	1.00	87.67
scnpilot_solids1_trim150_scaffold_24844_curated Species: R_Fluviicola_43_260 (50%)	2	1506 bp	40.77	1.00	87.65
scnpilot_solids1_trim150_scaffold_21010_curated Species: R_Fluviicola_43_260 (100%)	1	1696 bp	42.69	1.00	87.56
scnpilot_solids1_trim150_scaffold_31740_curated Species: Formosa sp. AK20 (50%)	2	1261 bp	37.99	1.00	87.55
scnpilot_solids1_trim150_scaffold_29736_curated Species: Fluviicola taffensis (100%)	2	1323 bp	37.87	1.00	87.53
scnpilot_solids1_trim150_scaffold_12303_curated Species: Fluviicola taffensis (66.67%)	3	3357 bp	39.20	1.00	87.49

Displaying items 451-500 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help