ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 551-600 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_35327_curated Species: R_Fluviicola_43_260 (100%)	2	1026 bp	36.74	1.00	88.30
scnpilot_solids1_trim150_scaffold_18441_curated Species: Elizabethkingia meningoseptica (50%)	2	1859 bp	40.61	1.00	87.30
scnpilot_solids1_trim150_scaffold_33490_curated Species: Pseudopedobacter saltans (50%)	2	1050 bp	38.10	1.00	61.14
scnpilot_solids1_trim150_scaffold_41654_curated Species: Chryseobacterium gleum (50%)	2	927 bp	37.00	1.00	70.55
scnpilot_solids1_trim150_scaffold_38932_curated Species: Flavobacteriales bacterium BRH_c54 (50%)	2	684 bp	36.99	1.00	79.82
scnpilot_solids1_trim150_scaffold_19512_curated Species: Chryseobacterium solincola (50%)	2	1788 bp	47.71	1.00	86.58
scnpilot_solids1_trim150_scaffold_12624_curated Species: Bergeyella zoohelcum (50%)	2	2401 bp	34.94	1.00	75.09
scnpilot_solids1_trim150_scaffold_19259_curated Species: R_Fluviicola_43_260 (50%)	2	2545 bp	42.79	1.00	84.28
scnpilot_solids1_trim150_scaffold_24731_curated Species: Chryseobacterium sp. JM1 (100%)	2	1468 bp	35.15	1.00	99.73
scnpilot_solids1_trim150_scaffold_37403_curated Species: Flavobacterium enshiense (50%)	2	1099 bp	39.13	1.00	93.08
scnpilot_solids1_trim150_scaffold_43055_curated Species: Myroides odoratimimus (50%)	2	1008 bp	36.51	1.00	93.15
scnpilot_solids1_trim150_scaffold_33065_curated Species: Flavobacterium hydatis (50%)	2	1224 bp	52.70	1.00	99.51
scnpilot_solids1_trim150_scaffold_41560_curated Species: Chryseobacterium taiwanense (50%)	2	899 bp	38.82	1.00	89.10
scnpilot_solids1_trim150_scaffold_30003_curated Species: Zunongwangia profunda (50%)	2	1325 bp	39.02	1.00	98.94
scnpilot_solids1_trim150_scaffold_40926_curated Species: Flavobacterium sp. 316 (50%)	2	1047 bp	35.63	1.00	99.14
scnpilot_solids1_trim150_scaffold_28532_curated Species: Flavobacteriaceae bacterium 3519-10 (50%)	2	1346 bp	37.96	1.00	49.70
scnpilot_solids1_trim150_scaffold_32760_curated Species: Gramella forsetii (50%)	2	1232 bp	34.42	1.00	58.93
scnpilot_solids1_trim150_scaffold_29946_curated Species: Flavobacterium sp. 316 (50%)	2	1248 bp	34.21	1.00	83.89
scnpilot_solids1_trim150_scaffold_43176_curated Species: R_Fluviicola_43_260 (50%)	2	899 bp	40.16	1.00	91.77
scnpilot_solids1_trim150_scaffold_43323_curated Species: Galbibacter marinus (100%)	2	1003 bp	36.09	1.00	79.56
scnpilot_solids1_trim150_scaffold_43023_curated Species: Fluviicola taffensis (50%)	2	1002 bp	41.12	1.00	96.11
scnpilot_solids1_trim150_scaffold_43364_curated Species: Chryseobacterium luteum (50%)	2	1003 bp	42.37	1.00	95.41
scnpilot_solids1_trim150_scaffold_28348_curated Species: Flavobacterium beibuense (50%)	2	1235 bp	33.20	1.00	95.47
scnpilot_solids1_trim150_scaffold_42588_curated Species: R_Fluviicola_43_260 (50%)	2	1015 bp	36.55	1.00	91.33
scnpilot_solids1_trim150_scaffold_26666_curated Species: Chryseobacterium sp. JM1 (50%)	2	1268 bp	37.62	1.00	92.98
scnpilot_solids1_trim150_scaffold_35588_curated Species: R_Fluviicola_43_260 (50%)	2	1160 bp	37.67	1.00	92.59
scnpilot_solids1_trim150_scaffold_40610_curated Species: Flavobacterium sp. 316 (50%)	2	1053 bp	39.89	1.00	98.29
scnpilot_solids1_trim150_scaffold_25877_curated Species: Chryseobacterium formosense (50%)	2	1442 bp	32.11	1.00	99.45
scnpilot_solids1_trim150_scaffold_27994_curated Species: Fluviicola taffensis (50%)	2	1261 bp	32.51	1.00	73.75
scnpilot_solids1_trim150_scaffold_26052_curated Species: Fluviicola taffensis (50%)	2	1452 bp	38.09	1.00	70.66
scnpilot_solids1_trim150_scaffold_17696_curated Species: Chryseobacterium formosense (50%)	2	1915 bp	36.81	1.00	97.28
scnpilot_solids1_trim150_scaffold_25622_curated Species: R_Fluviicola_43_260 (50%)	2	1459 bp	41.95	1.00	67.85
scnpilot_solids1_trim150_scaffold_29327_curated Species: R_Fluviicola_43_260 (50%)	2	1180 bp	38.39	1.00	91.53
scnpilot_solids1_trim150_scaffold_34490_curated Species: Fluviicola taffensis (50%)	2	1044 bp	33.24	1.00	89.66
scnpilot_solids1_trim150_scaffold_36667_curated Species: Fluviicola taffensis (100%)	2	1136 bp	40.67	1.00	100.09
scnpilot_solids1_trim150_scaffold_36227_curated Species: Flavobacterium subsaxonicum (50%)	2	1145 bp	36.77	1.00	97.99
scnpilot_solids1_trim150_scaffold_38404_curated Species: Chryseobacterium piperi (50%)	2	1092 bp	42.03	1.00	62.91
scnpilot_solids1_trim150_scaffold_22413_curated Species: Weeksella virosa (50%)	2	1562 bp	38.60	1.00	95.45
scnpilot_solids1_trim150_scaffold_35563_curated Species: Schleiferia thermophila (50%)	2	1161 bp	31.27	1.00	100.00
scnpilot_solids1_trim150_scaffold_36228_curated Species: Nonlabens ulvanivorans (50%)	2	1145 bp	40.79	1.00	86.72
scnpilot_solids1_trim150_scaffold_24371_curated Species: Fluviicola taffensis (50%)	2	1478 bp	37.48	1.00	91.75
scnpilot_solids1_trim150_scaffold_9471_curated Species: Fluviicola taffensis (100%)	2	2998 bp	44.20	1.00	99.57
scnpilot_solids1_trim150_scaffold_15558_curated Species: Flavobacterium beibuense (50%)	2	2099 bp	38.69	1.00	56.03
scnpilot_solids1_trim150_scaffold_34235_curated Species: Flavobacterium hydatis (50%)	2	1046 bp	45.79	1.00	99.24
scnpilot_solids1_trim150_scaffold_29467_curated Species: Flavobacterium sp. KMS (50%)	2	1243 bp	35.56	1.00	93.40
scnpilot_solids1_trim150_scaffold_34568_curated Species: Chryseobacterium soli (50%)	2	1186 bp	40.47	1.00	100.93
scnpilot_solids1_trim150_scaffold_39689_curated Species: Flavobacterium sp. AED (50%)	2	1071 bp	43.04	1.00	93.84
scnpilot_solids1_trim150_scaffold_39787_curated Species: Fluviicola taffensis (50%)	2	984 bp	39.94	1.00	88.72
scnpilot_solids1_trim150_scaffold_31229_curated Species: Elizabethkingia meningoseptica (50%)	2	1276 bp	34.72	1.00	94.98
scnpilot_solids1_trim150_scaffold_31672_curated Species: Flavobacterium hibernum (50%)	2	1263 bp	40.78	1.00	95.49

Displaying items 551-600 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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