ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 251-300 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_29790_curated Species: Flavobacterium enshiense (50%)	2	1321 bp	42.47	1.00	81.98
scnpilot_solids1_trim150_scaffold_20382_curated Species: Chryseobacterium antarcticum (50%)	2	1736 bp	39.11	1.00	79.49
scnpilot_solids1_trim150_scaffold_23348_curated Species: Fluviicola taffensis (50%)	2	1587 bp	42.97	1.00	97.73
scnpilot_solids1_trim150_scaffold_27437_curated Species: Elizabethkingia meningoseptica (50%)	2	1401 bp	40.04	1.00	68.09
scnpilot_solids1_trim150_scaffold_37545_curated Species: Alistipes indistinctus (50%)	2	1046 bp	43.98	1.00	89.48
scnpilot_solids1_trim150_scaffold_41607_curated Species: R_Fluviicola_43_260 (100%)	2	1033 bp	41.63	1.00	95.55
scnpilot_solids1_trim150_scaffold_37185_curated Species: Flavobacterium sp. AED (50%)	2	1124 bp	41.73	1.00	92.35
scnpilot_solids1_trim150_scaffold_16166_curated Species: Elizabethkingia meningoseptica (50%)	2	2041 bp	35.52	1.00	86.28
scnpilot_solids1_trim150_scaffold_40556_curated Species: Flavobacterium sp. F52 (50%)	2	1054 bp	33.59	1.00	70.02
scnpilot_solids1_trim150_scaffold_20928_curated Species: Flavobacteriales bacterium BRH_c54 (50%)	2	1675 bp	40.24	1.00	92.06
scnpilot_solids1_trim150_scaffold_41708_curated Species: R_Fluviicola_43_260 (50%)	2	1031 bp	40.74	1.00	92.82
scnpilot_solids1_trim150_scaffold_21809_curated Species: Flavobacterium sp. MEB061 (50%)	2	1594 bp	38.58	1.00	97.49
scnpilot_solids1_trim150_scaffold_40554_curated Species: Sphingobacterium paucimobilis (50%)	2	1054 bp	29.22	1.00	23.62
scnpilot_solids1_trim150_scaffold_19645_curated Species: Fluviicola taffensis (100%)	2	1779 bp	39.24	1.00	76.73
scnpilot_solids1_trim150_scaffold_14694_curated Species: Imtechella halotolerans (50%)	2	2192 bp	44.25	1.00	99.22
scnpilot_solids1_trim150_scaffold_14285_curated Species: Vitellibacter vladivostokensis (50%)	2	2237 bp	39.79	1.00	72.82
scnpilot_solids1_trim150_scaffold_12974_curated Species: Marivirga tractuosa (50%)	2	2393 bp	32.01	1.00	25.83
scnpilot_solids1_trim150_scaffold_20596_curated Species: Fluviicola taffensis (50%)	2	1722 bp	37.98	1.00	100.17
scnpilot_solids1_trim150_scaffold_25606_curated Species: R_Fluviicola_43_260 (50%)	2	1353 bp	31.93	1.00	45.23
scnpilot_solids1_trim150_scaffold_17350_curated Species: Owenweeksia hongkongensis (50%)	2	1942 bp	36.87	1.00	94.85
scnpilot_solids1_trim150_scaffold_35976_curated Species: Flavobacterium johnsoniae (50%)	2	1100 bp	47.36	1.00	82.64
scnpilot_solids1_trim150_scaffold_30229_curated Species: Chryseobacterium gleum (50%)	2	1307 bp	35.12	1.00	95.94
scnpilot_solids1_trim150_scaffold_40099_curated Species: R_Fluviicola_43_260 (50%)	2	1032 bp	38.57	1.00	97.38
scnpilot_solids1_trim150_scaffold_41665_curated Species: Fluviicola taffensis (50%)	2	1032 bp	36.92	1.00	90.70
scnpilot_solids1_trim150_scaffold_10717_curated Species: Nonlabens dokdonensis (50%)	2	2741 bp	34.80	1.00	100.69
scnpilot_solids1_trim150_scaffold_24229_curated Species: Elizabethkingia meningoseptica (50%)	2	1533 bp	35.75	1.00	85.52
scnpilot_solids1_trim150_scaffold_30388_curated Species: Chryseobacterium soli (50%)	2	1233 bp	41.12	1.00	99.76
scnpilot_solids1_trim150_scaffold_26130_curated Species: Gillisia limnaea (50%)	2	1380 bp	39.49	1.00	96.09
scnpilot_solids1_trim150_scaffold_24031_curated Species: R_Fluviicola_43_260 (50%)	2	1386 bp	40.19	1.00	99.13
scnpilot_solids1_trim150_scaffold_26506_curated Species: Chryseobacterium jeonii (50%)	2	1438 bp	38.39	1.00	75.52
scnpilot_solids1_trim150_scaffold_38552_curated Species: Chryseobacterium soli (50%)	2	1094 bp	37.66	1.00	92.96
scnpilot_solids1_trim150_scaffold_29179_curated Species: Elizabethkingia meningoseptica (50%)	2	1031 bp	45.20	1.00	100.10
scnpilot_solids1_trim150_scaffold_38803_curated Species: Joostella marina (50%)	2	1090 bp	37.34	1.00	99.63
scnpilot_solids1_trim150_scaffold_14544_curated Species: Paenibacillus stellifer (50%)	2	2207 bp	37.47	1.00	61.30
scnpilot_solids1_trim150_scaffold_24318_curated Species: Elizabethkingia meningoseptica (50%)	2	1528 bp	43.65	1.00	99.15
scnpilot_solids1_trim150_scaffold_31631_curated Species: Pedobacter heparinus (50%)	2	1230 bp	50.65	1.00	99.76
scnpilot_solids1_trim150_scaffold_21898_curated Species: Niastella koreensis (50%)	2	1542 bp	43.26	1.00	93.00
scnpilot_solids1_trim150_scaffold_36262_curated Species: Fluviicola taffensis (100%)	2	1145 bp	44.54	1.00	99.30
scnpilot_solids1_trim150_scaffold_16182_curated Species: R_Fluviicola_43_260 (50%)	2	1981 bp	38.26	1.00	81.93
scnpilot_solids1_trim150_scaffold_34538_curated Species: GWB1_Spirochaetes_36_13_curated (50%)	2	1187 bp	36.31	1.00	53.33
scnpilot_solids1_trim150_scaffold_32658_curated Species: Chryseobacterium jeonii (50%)	2	1235 bp	38.95	1.00	100.81
scnpilot_solids1_trim150_scaffold_37599_curated Species: Nonlabens ulvanivorans (50%)	2	914 bp	38.95	1.00	100.44
scnpilot_solids1_trim150_scaffold_23641_curated Species: Cellulophaga geojensis (50%)	2	1562 bp	33.23	1.00	71.64
scnpilot_solids1_trim150_scaffold_20446_curated Species: Elizabethkingia miricola (50%)	2	1732 bp	38.86	1.00	56.64
scnpilot_solids1_trim150_scaffold_29529_curated Species: R_Fluviicola_43_260 (50%)	2	1174 bp	43.53	1.00	99.40
scnpilot_solids1_trim150_scaffold_30367_curated Species: Niastella koreensis (50%)	2	1303 bp	27.40	1.00	24.18
scnpilot_solids1_trim150_scaffold_27077_curated Species: Flavobacterium sp. MEB061 (50%)	2	1416 bp	49.08	1.00	99.15
scnpilot_solids1_trim150_scaffold_29679_curated Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	1324 bp	39.05	1.00	88.60
scnpilot_solids1_trim150_scaffold_39813_curated Species: Chryseobacterium formosense (50%)	2	879 bp	42.89	1.00	95.22
scnpilot_solids1_trim150_scaffold_37596_curated Species: Fluviicola taffensis (50%)	2	1114 bp	42.37	1.00	99.64

Displaying items 251-300 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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