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scnpilot_solids1_trim150_scaffold_3153_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3153_curated_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3153_curated_2
unknown

Not on your lists

comp(267..920)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3153_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1075..1707)
DNA (633bp) protein (211aa)
NmrA family protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D665_PAESJ
Uncharacterized protein {ECO:0000313|EMBL:KIC91500.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NmrA family protein
scnpilot_solids1_trim150_scaffold_3153_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1712..3445)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT
Peptidase M28 {ECO:0000313|EMBL:AHG91923.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3153_curated_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3599..4132)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39844.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_3153_curated_6

Not on your lists

comp(4275..5294)
DNA (1020bp) protein (340aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
Gll0595 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NN19_GLOVI
scnpilot_solids1_trim150_scaffold_3153_curated_7
unknown

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comp(5578..5757)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3153_curated_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5757..6353)
DNA (597bp) protein (199aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AHG92506.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3153_curated_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6602..7264)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37284.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_3153_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7307..7786)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y182_RAMTT
NUDIX hydrolase {ECO:0000313|EMBL:AHG89142.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3153_curated_11
unknown

Not on your lists

8168..8332
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3153_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8383..8937)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4W2_GEMAT
Phosphoglycerate mutase {ECO:0000313|EMBL:AHG88922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3153_curated_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9105..9770)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCH7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA91026.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3153_curated_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9773..10255)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBI4_SALRM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
scnpilot_solids1_trim150_scaffold_3153_curated_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10359..12554)
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
scnpilot_solids1_trim150_scaffold_3153_curated_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13541..14587
DNA (1047bp) protein (349aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B7_GEMAT
two-component histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_3153_curated_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14541..15431
DNA (891bp) protein (297aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG88933.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
OmpR family two-component response regulator
scnpilot_solids1_trim150_scaffold_3153_curated_18
unknown

Not on your lists

comp(15425..15532)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 18 items

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