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scnpilot_solids1_trim150_scaffold_1376_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1376_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
fruA; phosphotransferase system enzyme IIA component; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V8_GEMAT
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 {ECO:0000313|EMBL:AHG90923.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1376_curated_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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496..1527
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V7_GEMAT
putative tRNA-dihydrouridine synthase
scnpilot_solids1_trim150_scaffold_1376_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1524..2276
DNA (753bp) protein (251aa)
NCAIR mutase-like protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F6I6_DESDL
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:AHG90921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NCAIR mutase-like protein
scnpilot_solids1_trim150_scaffold_1376_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2962..5625)
DNA (2664bp) protein (888aa)
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036C1CD4
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:AHG90919.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1376_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5652..7037)
DNA (1386bp) protein (462aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V5_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7059..9356)
DNA (2298bp) protein (766aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmat
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V4_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9356..9664)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG90916.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=14426639 bin=bin1_lowGC species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein; K09981 hypothetical protein
scnpilot_solids1_trim150_scaffold_1376_curated_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9715..10407)
DNA (693bp) protein (231aa)
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=379066 species=
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V3_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10413..10688)
DNA (276bp) protein (92aa)
purS; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
Phosphoribosylformylglycinamidine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V2_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10685..11611)
DNA (927bp) protein (309aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:BAH38776.1}; EC=2.7.8.8 {ECO:0000313|EMBL:BAH38776.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V1_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11608..12264)
DNA (657bp) protein (219aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V0_GEMAT
scnpilot_solids1_trim150_scaffold_1376_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12261..13184)
DNA (924bp) protein (308aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
scnpilot_solids1_trim150_scaffold_1376_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13181..13639)
DNA (459bp) protein (153aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
purB; adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U8_GEMAT
Displaying 13 items

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