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scnpilot_solids1_trim150_scaffold_1370_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1370_curated_1
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1345)
DNA (1344bp) protein (448aa)
cytochrome-c oxidase (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome-c oxidase {ECO:0000313|EMBL:ACT51798.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACT51798.1};; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Cytochrome-c oxidase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XB28_METSD
scnpilot_solids1_trim150_scaffold_1370_curated_2
unknown

Not on your lists

comp(1342..1590)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1370_curated_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1716..2390)
DNA (675bp) protein (225aa)
Hemolysin-3 (Hemolysin III) (Hly-III) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CL82_THIA3
Hemolysin-3 (Hemolysin III) (Hly-III)
Tax=RBG_16_Gamma2_60_9_curated
scnpilot_solids1_trim150_scaffold_1370_curated_4
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2390..3517)
DNA (1128bp) protein (376aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophanyl-tRNA synthetase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IU36_9BURK
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ESJ21467.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
scnpilot_solids1_trim150_scaffold_1370_curated_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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3669..4052
DNA (384bp) protein (128aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHJ7_9CHLR
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CCF84159.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
cupin 2 barrel domain-containing protein
scnpilot_solids1_trim150_scaffold_1370_curated_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4081..5307
DNA (1227bp) protein (409aa)
ilvA; threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P9C4_9DELT
Threonine dehydratase {ECO:0000313|EMBL:EPX58882.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
scnpilot_solids1_trim150_scaffold_1370_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5307..5759
DNA (453bp) protein (151aa)
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids1_trim150_scaffold_1370_curated_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5847..6065
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI000361EC07
Uncharacterized protein {ECO:0000313|EMBL:AHG87942.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
regulator of cell morphogenesis and NO signaling
scnpilot_solids1_trim150_scaffold_1370_curated_9
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(6214..6441)
DNA (228bp) protein (76aa)
hemerythrin n=1 Tax=Thermus scotoductus RepID=UPI000363EC06
hemerythrin HHE cation binding protein
Hemerythrin HHE cation binding protein {ECO:0000313|EMBL:ADW22359.1}; TaxID=743525 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;"
scnpilot_solids1_trim150_scaffold_1370_curated_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6526..7257)
DNA (732bp) protein (244aa)
hypothetical protein id=12554371 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids1_trim150_scaffold_1370_curated_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7254..8540)
DNA (1287bp) protein (429aa)
hypothetical protein id=12554373 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids1_trim150_scaffold_1370_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8621..9772)
DNA (1152bp) protein (384aa)
ATPase involved in chromosome partitioning n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ANI1_9BACT
ATPase-like, ParA/MinD {ECO:0000313|EMBL:AHG93219.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning
scnpilot_solids1_trim150_scaffold_1370_curated_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10040..11590
DNA (1551bp) protein (517aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACM6_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAH40253.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1370_curated_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11652..12251)
DNA (600bp) protein (200aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBS4_SINAD
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:AGA26288.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids1_trim150_scaffold_1370_curated_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(12355..13083)
DNA (729bp) protein (243aa)
Transcriptional regulator, Crp/Fnr family id=1904655 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
scnpilot_solids1_trim150_scaffold_1370_curated_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

13245..13547
DNA (303bp) protein (101aa)
hypothetical protein id=12554372 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 16 items

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