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scnpilot_solids1_trim150_scaffold_2005_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2005_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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134..712
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG89604.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2005_curated_2
unknown

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803..1045
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2005_curated_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1641..2891
DNA (1251bp) protein (417aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:CDM65178.1}; EC=2.5.1.56 {ECO:0000313|EMBL:CDM65178.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
N-acylneuraminate-9-phosphate synthase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RE58_9PLAN
scnpilot_solids1_trim150_scaffold_2005_curated_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2888..4048
DNA (1161bp) protein (387aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000363599D
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:CDM65179.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
scnpilot_solids1_trim150_scaffold_2005_curated_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4148..4894
DNA (747bp) protein (249aa)
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:CDM65180.1}; EC=2.7.7.43 {ECO:0000313|EMBL:CDM65180.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JD89_9DELT
scnpilot_solids1_trim150_scaffold_2005_curated_6

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4891..6798
DNA (1908bp) protein (636aa)
lipid A ABC exporter ATPase and inner membrane proteins MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Phospholipid/lipopolysaccharide-flipping ABC transporter MsbA n=2 Tax=Geobacter sulfurreducens RepID=D7AM81_GEOSK
Lipid A ABC exporter {ECO:0000313|EMBL:AHZ45570.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_2005_curated_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6795..7544
DNA (750bp) protein (250aa)
N-acetylneuraminate cytidylyltransferase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
N-acetylneuraminate cytidylyltransferase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKG6_GEOSK
N-acetylneuraminate cytidylyltransferase {ECO:0000313|EMBL:AAR35348.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
scnpilot_solids1_trim150_scaffold_2005_curated_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7534..8439
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6G4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23619.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
scnpilot_solids1_trim150_scaffold_2005_curated_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8424..9476
DNA (1053bp) protein (351aa)
polysaccharide biosynthesis protein; K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
N-acetylneuraminate synthase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKG4_GEOSK
N-acetylneuraminate synthase {ECO:0000313|EMBL:AAR35346.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
scnpilot_solids1_trim150_scaffold_2005_curated_10
unknown

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9487..9738
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 10 items

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