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scnpilot_solids1_trim150_scaffold_4052_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4052_curated_1
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1102
DNA (1101bp) protein (367aa)
integrase n=1 Tax=Longispora albida RepID=UPI00035EDFB9
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG87865.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_4052_curated_2
unknown

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1115..1351
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4052_curated_3
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1533..3245)
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375394
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW12765.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
scnpilot_solids1_trim150_scaffold_4052_curated_4
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3259..3996)
DNA (738bp) protein (246aa)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:EED05915.1}; EC=3.1.21.4 {ECO:0000313|EMBL:EED05915.1};; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;"
bstVIR; type-2 restriction enzyme BstVI (R.BstVI) (Type II restriction enzyme BstVI) (Endonuclease BstVI) (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DVE2_9BACL
scnpilot_solids1_trim150_scaffold_4052_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4032..5168)
DNA (1137bp) protein (379aa)
putative fatty-acid desaturase; K03921 acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2]
Putative fatty-acid desaturase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE61_GEMAT
Fatty acid desaturase type 2 {ECO:0000313|EMBL:AHG88662.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_4052_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5210..5689)
DNA (480bp) protein (160aa)
UPF0178 protein RE6C_04168 n=2 Tax=Rhodopirellula europaea RepID=M2AZZ0_9PLAN
UPF0178 protein J421_5334 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K09768 hypothetical protein
scnpilot_solids1_trim150_scaffold_4052_curated_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5877..6914
DNA (1038bp) protein (346aa)
X-Pro dipeptidyl-peptidase C-terminal domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028H9_SOLUE
X-Pro dipeptidyl-peptidase domain-containing protein; K06978
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_4052_curated_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6854..7813
DNA (960bp) protein (320aa)
X-Pro dipeptidyl-peptidase C-terminal domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028H9_SOLUE
X-Pro dipeptidyl-peptidase domain-containing protein; K06978
X-Pro dipeptidyl-peptidase C-terminal domain protein {ECO:0000313|EMBL:ABJ82573.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_solids1_trim150_scaffold_4052_curated_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7886..8668
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4052_curated_10
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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8757..8960
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI0003629682
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_4052_curated_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9006..9596
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG70_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52895.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4052_curated_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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9743..9934
DNA (192bp) protein (64aa)
Putative uncharacterized protein id=2689456 bin=GWB1_Spirochaetes_59_5 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
scnpilot_solids1_trim150_scaffold_4052_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10078..10353
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D2981B
Uncharacterized protein {ECO:0000313|EMBL:AHG88711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 13 items

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